Development of a quadruple qRT-PCR assay for simultaneous identification of hypervirulent and carbapenem-resistant Klebsiella pneumoniae

Microbiol Spectr. 2024 Jan 11;12(1):e0071923. doi: 10.1128/spectrum.00719-23. Epub 2023 Dec 7.

Abstract

Globally, the increasing number of hypervirulent Klebsiella pneumoniae (hvKp) and carbapenem-resistant Kp (CR-Kp) infections poses a huge public health challenge with high morbidity and mortality. Worrisomely, due to the mobility of elements carrying virulence and drug-resistance genes, the increasing prevalence of CR-hvKp has also been found with an overwhelming mortality rate in recent years. However, the current detection methods for hvKp and CR-Kp have many disadvantages, such as long turnaround time, complex operation, low sensitivity, and specificity. Herein, a more sensitive, rapid, single-reaction, and multiplex quantitative real-time PCR was developed and validated to differentiate the circulating lineages of Kp with excellent performance in sensitivity and specificity, providing a useful tool for the differential diagnosis and the surveillance of the circulating Kp.

Keywords: Klebsiella pneumoniae; carbapenem-resistant; differential diagnosis; hypervirulent; multiplex qRT-PCR.

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • Carbapenem-Resistant Enterobacteriaceae* / genetics
  • Carbapenems / pharmacology
  • Humans
  • Klebsiella Infections* / diagnosis
  • Klebsiella Infections* / epidemiology
  • Klebsiella pneumoniae / genetics
  • Real-Time Polymerase Chain Reaction
  • Virulence / genetics

Substances

  • Carbapenems
  • Anti-Bacterial Agents