Size-dependent steady state saturation limit in biomolecular transport through nuclear membranes

PLoS One. 2024 Apr 16;19(4):e0297738. doi: 10.1371/journal.pone.0297738. eCollection 2024.

Abstract

The nucleus preserves the genomic DNA of eukaryotic organisms and maintains the integrity of the cell by regulating the transport of molecules across the nuclear membrane. It is hitherto assumed that small molecules having a size below the passive permeability limit are allowed to diffuse freely to the nucleus while the transport of larger molecules is regulated via an active mechanism involving energy. Here we report on the kinetics of nuclear import and export of dextran molecules having a size below the passive permeability limit. The studies carried out using time-lapse confocal fluorescence microscopy show a clear deviation from the passive diffusion model. In particular, it is observed that the steady-state concentration of dextran molecules inside the nucleus is consistently less than the concentration outside, in contradiction to the predictions of the passive diffusion model. Detailed analysis and modeling of the transport show that the nuclear export rates significantly differ from the import rates, and the difference in rates is dependent on the size of the molecules. The nuclear export rates are further confirmed by an independent experimental study where we observe the diffusion of dextran molecules from the nucleus directly. Our experiments and transport model would suggest that the nucleus actively rejects exogenous macromolecules even below the passive permeability limit. This result can have a significant impact on biomedical research, especially in areas related to targeted drug delivery and gene therapy.

MeSH terms

  • Active Transport, Cell Nucleus
  • Cell Nucleus* / metabolism
  • Dextrans / metabolism
  • Diffusion
  • Nuclear Envelope* / metabolism

Substances

  • Dextrans

Grants and funding

The authors gratefully acknowledge the financial support received from the Science and Engineering Research Board (SERB EMR/2016/003687). The authors are thankful for the financial support to the Department of Physics, BITS Pilani Goa campus by the Department of Science and Technology, Govt. of India under the DST-FIST scheme (Ref No. SR/FST/PSI-142/2009; SR/FST/PS-I/2017/21). P.K. Shakhi acknowledges the Council of Scientific and Industrial Research, Govt. of India for a Senior Research Fellowship. Dr. Geetha K. Varier would like to thank the Department of Science and Technology for a research fellowship under the DST-WOS-A scheme (WOS-A/PM-32/2018). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.