Role of small nucleolar RNAs in alternative splicing of the doublesex gene in the silkworm, Bombyx mori

Arch Insect Biochem Physiol. 2024 May;116(1):e22117. doi: 10.1002/arch.22117.

Abstract

More and more evidence shows that small noncoding RNAs (ncRNAs) play diverse roles in development, stress response and other cellular processes, but functional study of intermediate-size ncRNAs is still rare. Here, the expression profile of 16 intermediate-size ncRNAs in ovary and testis of silkworm Bombyx mori were analyzed. Twelve ncRNAs, including 5 small nucleolar RNAs (snoRNAs) and 7 unclassified ncRNAs, accumulated more in the testis than in the ovary of silkworm, especially Bm-163, Bm-51 and Bm-68. Four ncRNAs (including three orphan snoRNAs and one unclassified ncRNA) had higher expression level in the ovary than in the testis, especially Bm-86. Overexpression of the testis-enriched snoRNA Bm-68 in the female led to the accumulation of male-specific isoform of doublesex (BmdsxM) and increased the expression ratio of BmdsxM: BmdsxF. While overexpression of ovary-enriched snoRNA Bm-86 in the male decreased the expression ratio of BmdsxM: BmdsxF, indicating the roles of the two snoRNAs played in the alternative splicing of Bmdsx of silkworm, which will provide new clues for the functional study of snoRNAs in insects.

Keywords: Bmdsx; sex determination; silkworm; snoRNA.

MeSH terms

  • Alternative Splicing*
  • Animals
  • Bombyx* / genetics
  • Bombyx* / metabolism
  • DNA-Binding Proteins*
  • Female
  • Insect Proteins* / genetics
  • Insect Proteins* / metabolism
  • Male
  • Ovary / metabolism
  • RNA, Small Nucleolar* / genetics
  • RNA, Small Nucleolar* / metabolism
  • Testis / metabolism

Substances

  • Bmdsx protein, Bombyx mori
  • DNA-Binding Proteins
  • Insect Proteins
  • RNA, Small Nucleolar