TRAMP: a software package for generating transposon maps

Comput Appl Biosci. 1995 Apr;11(2):173-9. doi: 10.1093/bioinformatics/11.2.173.

Abstract

TRAMP is a software package for generating transposon maps that are used for DNA sequencing. The package provides a variety of automated tools that can always be overridden by the user. The central part of the package is its selection algorithm that finds the most robust map with the smallest number of inserts. TRAMP has been in daily use by the sequencing team at LBL since it was introduced in the Spring of 1994. It is applicable to any sequencing project utilizing the directed strategy.

Publication types

  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Algorithms
  • Chromosome Mapping*
  • DNA Transposable Elements*
  • Sequence Analysis, DNA
  • Software*

Substances

  • DNA Transposable Elements