Evidence for participation of aspartate-84 as a catalytic group at the active site of porphobilinogen deaminase obtained by site-directed mutagenesis of the hemC gene from Escherichia coli

Biochemistry. 1994 Mar 8;33(9):2688-95. doi: 10.1021/bi00175a043.

Abstract

The role of aspartate-84, an invariant residue in the active site cleft of Escherichia coli porphobilinogen deaminase, has been investigated by site-directed mutagenesis. Substitution of aspartate-84 by glutamate results in an enzyme that retains less than 1% of its activity and which can form highly stable enzyme-intermediate complexes. Substitution of aspartate-84 by either alanine or asparagine, however, results in proteins unable to catalyze the formation of preuroporphyrinogen but which, nevertheless, appear able to assemble the dipyrromethane cofactor. The mechanisms of the tetramerization reaction and cofactor assembly are discussed.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aspartic Acid / chemistry
  • Base Sequence
  • Binding Sites
  • Catalysis
  • Escherichia coli / enzymology
  • Genes, Bacterial
  • Hydroxymethylbilane Synthase / chemistry*
  • Molecular Sequence Data
  • Mutagenesis, Site-Directed
  • Oligodeoxyribonucleotides / chemistry
  • Protein Structure, Tertiary

Substances

  • Oligodeoxyribonucleotides
  • Aspartic Acid
  • Hydroxymethylbilane Synthase