Single juveniles of the potato cyst nematodes Globodera rostochiensis and G. pallida differentiated by randomly amplified polymorphic DNA

Parasitology. 1993 Dec:107 ( Pt 5):567-72. doi: 10.1017/s0031182000068153.

Abstract

Random amplified polymorphic DNA (RAPD) offers a potential basis for the development of a diagnostic assay to differentiate the potato cyst nematode species Globodera rostochiensis and G. pallida. Nine decamer primers have been tested for their ability to amplify species-specific DNA sequences. Primer OPG-05 produced 2 discrete DNA fragments, which were consistently present in 5 G. rostochiensis populations and absent in 5 G. pallida populations. These fragments were detectable in single females as well as in single 2nd-stage juveniles. Their amplification is extremely efficient, and reproducible over a wide range of template concentrations. One-fifth of a single juvenile is sufficient to generate reproducible RAPD markers. The amplification from single juveniles requires no DNA isolation. The use of a crude homogenate does not impair the polymerase chain reaction.

Publication types

  • Comparative Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Base Sequence
  • DNA / analysis*
  • DNA / genetics
  • DNA Primers
  • Female
  • Molecular Sequence Data
  • Nematoda / classification*
  • Nematoda / genetics*
  • Nematoda / growth & development
  • Polymerase Chain Reaction / methods*
  • Solanum tuberosum
  • Species Specificity

Substances

  • DNA Primers
  • DNA