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Inconsistency in large pharmacogenomic studies.
Haibe-Kains B, El-Hachem N, Birkbak NJ, Jin AC, Beck AH, Aerts HJ, Quackenbush J. Haibe-Kains B, et al. Among authors: beck ah. Nature. 2013 Dec 19;504(7480):389-93. doi: 10.1038/nature12831. Epub 2013 Nov 27. Nature. 2013. PMID: 24284626 Free PMC article.
Enhancing reproducibility in cancer drug screening: how do we move forward?
Hatzis C, Bedard PL, Birkbak NJ, Beck AH, Aerts HJ, Stem DF, Shi L, Clarke R, Quackenbush J, Haibe-Kains B. Hatzis C, et al. Among authors: beck ah. Cancer Res. 2014 Aug 1;74(15):4016-23. doi: 10.1158/0008-5472.CAN-14-0725. Epub 2014 Jul 11. Cancer Res. 2014. PMID: 25015668 Free PMC article. Review.
PharmacoGx: an R package for analysis of large pharmacogenomic datasets.
Smirnov P, Safikhani Z, El-Hachem N, Wang D, She A, Olsen C, Freeman M, Selby H, Gendoo DM, Grossmann P, Beck AH, Aerts HJ, Lupien M, Goldenberg A, Haibe-Kains B. Smirnov P, et al. Among authors: beck ah. Bioinformatics. 2016 Apr 15;32(8):1244-6. doi: 10.1093/bioinformatics/btv723. Epub 2015 Dec 9. Bioinformatics. 2016. PMID: 26656004
Revisiting inconsistency in large pharmacogenomic studies.
Safikhani Z, Smirnov P, Freeman M, El-Hachem N, She A, Rene Q, Goldenberg A, Birkbak NJ, Hatzis C, Shi L, Beck AH, Aerts HJWL, Quackenbush J, Haibe-Kains B. Safikhani Z, et al. Among authors: beck ah. F1000Res. 2016 Sep 16;5:2333. doi: 10.12688/f1000research.9611.3. eCollection 2016. F1000Res. 2016. PMID: 28928933 Free PMC article.
Safikhani et al. reply.
Safikhani Z, El-Hachem N, Smirnov P, Freeman M, Goldenberg A, Birkbak NJ, Beck AH, Aerts HJ, Quackenbush J, Haibe-Kains B. Safikhani Z, et al. Among authors: beck ah. Nature. 2016 Nov 30;540(7631):E6-E8. doi: 10.1038/nature20172. Nature. 2016. PMID: 27905416 No abstract available.
Safikhani et al. reply.
Safikhani Z, El-Hachem N, Smirnov P, Freeman M, Goldenberg A, Birkbak NJ, Beck AH, Aerts HJ, Quackenbush J, Haibe-Kains B. Safikhani Z, et al. Among authors: beck ah. Nature. 2016 Nov 30;540(7631):E11-E12. doi: 10.1038/nature20581. Nature. 2016. PMID: 27905423 No abstract available.
Safikhani et al. reply.
Safikhani Z, El-Hachem N, Smirnov P, Freeman M, Goldenberg A, Birkbak NJ, Beck AH, Aerts HJ, Quackenbush J, Haibe-Kains B. Safikhani Z, et al. Among authors: beck ah. Nature. 2016 Nov 30;540(7631):E2-E4. doi: 10.1038/nature19839. Nature. 2016. PMID: 27905430 No abstract available.
Significance analysis of prognostic signatures.
Beck AH, Knoblauch NW, Hefti MM, Kaplan J, Schnitt SJ, Culhane AC, Schroeder MS, Risch T, Quackenbush J, Haibe-Kains B. Beck AH, et al. PLoS Comput Biol. 2013;9(1):e1002875. doi: 10.1371/journal.pcbi.1002875. Epub 2013 Jan 24. PLoS Comput Biol. 2013. PMID: 23365551 Free PMC article.
The molecular basis of breast cancer pathological phenotypes.
Heng YJ, Lester SC, Tse GM, Factor RE, Allison KH, Collins LC, Chen YY, Jensen KC, Johnson NB, Jeong JC, Punjabi R, Shin SJ, Singh K, Krings G, Eberhard DA, Tan PH, Korski K, Waldman FM, Gutman DA, Sanders M, Reis-Filho JS, Flanagan SR, Gendoo DM, Chen GM, Haibe-Kains B, Ciriello G, Hoadley KA, Perou CM, Beck AH. Heng YJ, et al. Among authors: beck ah. J Pathol. 2017 Feb;241(3):375-391. doi: 10.1002/path.4847. Epub 2016 Dec 29. J Pathol. 2017. PMID: 27861902 Free PMC article.
154 results