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Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach.
Aerts HJ, Velazquez ER, Leijenaar RT, Parmar C, Grossmann P, Carvalho S, Bussink J, Monshouwer R, Haibe-Kains B, Rietveld D, Hoebers F, Rietbergen MM, Leemans CR, Dekker A, Quackenbush J, Gillies RJ, Lambin P. Aerts HJ, et al. Nat Commun. 2014 Jun 3;5:4006. doi: 10.1038/ncomms5006. Nat Commun. 2014. PMID: 24892406 Free PMC article.
GeneSigDB: a manually curated database and resource for analysis of gene expression signatures.
Culhane AC, Schröder MS, Sultana R, Picard SC, Martinelli EN, Kelly C, Haibe-Kains B, Kapushesky M, St Pierre AA, Flahive W, Picard KC, Gusenleitner D, Papenhausen G, O'Connor N, Correll M, Quackenbush J. Culhane AC, et al. Nucleic Acids Res. 2012 Jan;40(Database issue):D1060-6. doi: 10.1093/nar/gkr901. Epub 2011 Nov 21. Nucleic Acids Res. 2012. PMID: 22110038 Free PMC article.
Comparison and validation of genomic predictors for anticancer drug sensitivity.
Papillon-Cavanagh S, De Jay N, Hachem N, Olsen C, Bontempi G, Aerts HJ, Quackenbush J, Haibe-Kains B. Papillon-Cavanagh S, et al. J Am Med Inform Assoc. 2013 Jul-Aug;20(4):597-602. doi: 10.1136/amiajnl-2012-001442. Epub 2013 Jan 26. J Am Med Inform Assoc. 2013. PMID: 23355484 Free PMC article.
Significance analysis of prognostic signatures.
Beck AH, Knoblauch NW, Hefti MM, Kaplan J, Schnitt SJ, Culhane AC, Schroeder MS, Risch T, Quackenbush J, Haibe-Kains B. Beck AH, et al. PLoS Comput Biol. 2013;9(1):e1002875. doi: 10.1371/journal.pcbi.1002875. Epub 2013 Jan 24. PLoS Comput Biol. 2013. PMID: 23365551 Free PMC article.
Inconsistency in large pharmacogenomic studies.
Haibe-Kains B, El-Hachem N, Birkbak NJ, Jin AC, Beck AH, Aerts HJ, Quackenbush J. Haibe-Kains B, et al. Nature. 2013 Dec 19;504(7480):389-93. doi: 10.1038/nature12831. Epub 2013 Nov 27. Nature. 2013. PMID: 24284626 Free PMC article.
243 results