Regulation of histone acetylation during memory formation in the hippocampus

J Biol Chem. 2004 Sep 24;279(39):40545-59. doi: 10.1074/jbc.M402229200. Epub 2004 Jul 23.


Formation of long term memory begins with the activation of many disparate signaling pathways that ultimately impinge on the cellular mechanisms regulating gene expression. We investigated whether mechanisms regulating chromatin structure were activated during the early stages of long term memory formation in the hippocampus. Specifically, we investigated hippocampal histone acetylation during the initial stages of consolidation of long term association memories in a contextual fear conditioning paradigm. Acetylation of histone H3 in area CA1 of the hippocampus was regulated in contextual fear conditioning, an effect dependent on activation of N-methyl-D-aspartic acid (NMDA) receptors and ERK, and blocked using a behavioral latent inhibition paradigm. Activation of NMDA receptors in area CA1 in vitro increased acetylation of histone H3, and this effect was blocked by inhibition of ERK signaling. Moreover, activation of ERK in area CA1 in vitro through either the protein kinase C or protein kinase A pathways, biochemical events known to be involved in long term memory formation, also increased histone H3 acetylation. Furthermore, we observed that elevating levels of histone acetylation through the use of the histone deacetylase inhibitors trichostatin A or sodium butyrate enhanced induction of long term potentiation at Schaffer-collateral synapses in area CA1 of the hippocampus, a candidate mechanism contributing to long term memory formation in vivo. In concert with our findings in vitro, injection of animals with sodium butyrate prior to contextual fear conditioning enhanced formation of long term memory. These results indicate that histone-associated heterochromatin undergoes changes in structure during the formation of long term memory. Mimicking memory-associated changes in heterochromatin enhances a cellular process thought to underlie long term memory formation, hippocampal long term potentiation, and memory formation itself.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Acetylation
  • Animals
  • Behavior, Animal
  • Blotting, Western
  • Chromatin / metabolism
  • Cyclic AMP-Dependent Protein Kinases / metabolism
  • Electrophysiology
  • Fear
  • Heterochromatin / metabolism
  • Hippocampus / metabolism*
  • Hippocampus / physiology*
  • Histones / metabolism*
  • Hydroxamic Acids / pharmacology
  • Male
  • Memory*
  • Mitogen-Activated Protein Kinases / metabolism
  • Models, Biological
  • Models, Genetic
  • N-Methylaspartate / metabolism
  • Phosphorylation
  • Protein Kinase C / metabolism
  • Rats
  • Rats, Sprague-Dawley
  • Receptors, N-Methyl-D-Aspartate / metabolism
  • Sodium Oxybate / pharmacology
  • Time Factors


  • Chromatin
  • Heterochromatin
  • Histones
  • Hydroxamic Acids
  • Receptors, N-Methyl-D-Aspartate
  • trichostatin A
  • N-Methylaspartate
  • Sodium Oxybate
  • Cyclic AMP-Dependent Protein Kinases
  • Protein Kinase C
  • Mitogen-Activated Protein Kinases