Desulfatibacillum alkenivorans sp. nov., a novel n-alkene-degrading, sulfate-reducing bacterium, and emended description of the genus Desulfatibacillum

Int J Syst Evol Microbiol. 2004 Sep;54(Pt 5):1639-1642. doi: 10.1099/ijs.0.63104-0.

Abstract

An alkene-degrading, sulfate-reducing bacterium, strain PF2803T, was isolated from oil-polluted sediments (Fos Harbour, France). The cells were found to be Gram-negative, non-sporulating, non-motile and to have a slightly curved rod shape. Optimum growth occurred at 1 % (w/v) NaCl, pH 6.8 and 28-30 degrees C. Strain PF2803T oxidized alkenes (from C8 to C23). The G + C content of the genomic DNA was 57.8 mol% (HPLC). On the basis of 16S rRNA gene sequence analyses, strain PF2803T belongs to the family 'Desulfobacteraceae' in the class 'Deltaproteobacteria', with Desulfatibacillum aliphaticivorans as its closest relative (99.6 % identity). Comparative sequence analyses of the dissimilatory sulfite reductase (dsrAB) gene supported the affiliation of strain PF2803T to the genus Desulfatibacillum. DNA-DNA hybridization with its closest taxon demonstrated 48.4 % similarity. On the basis of the results of physiological and genetic analyses, strain PF2803T is identified as a novel species of the genus Desulfatibacillum, for which the name Desulfatibacillum alkenivorans sp. nov. is proposed. The type strain is PF2803T (= DSM 16219T = ATCC BAA-924T).

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alkenes / metabolism*
  • Anti-Bacterial Agents / pharmacology
  • Bacterial Outer Membrane Proteins / genetics
  • Bacterial Proteins / genetics
  • Bacterial Typing Techniques
  • Base Composition
  • Biodegradation, Environmental
  • DNA, Bacterial / chemistry
  • DNA, Bacterial / isolation & purification
  • DNA, Ribosomal / chemistry
  • DNA, Ribosomal / isolation & purification
  • Deltaproteobacteria / classification*
  • Deltaproteobacteria / cytology
  • Deltaproteobacteria / isolation & purification*
  • Deltaproteobacteria / metabolism
  • Deltaproteobacteria / physiology
  • Environmental Microbiology
  • France
  • Genes, rRNA
  • Molecular Sequence Data
  • Movement
  • Nucleic Acid Hybridization
  • Oxidation-Reduction
  • Phylogeny
  • RNA, Bacterial / genetics
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sewage / microbiology*
  • Sodium Chloride / pharmacology
  • Spores, Bacterial
  • Sulfates / metabolism*

Substances

  • Alkenes
  • Anti-Bacterial Agents
  • Bacterial Outer Membrane Proteins
  • Bacterial Proteins
  • DNA, Bacterial
  • DNA, Ribosomal
  • RNA, Bacterial
  • RNA, Ribosomal, 16S
  • Sewage
  • Sulfates
  • Sodium Chloride

Associated data

  • GENBANK/AY493562
  • GENBANK/AY504426