Subunit specificity of mutations that confer resistance to nonnucleoside inhibitors in human immunodeficiency virus type 1 reverse transcriptase

Antimicrob Agents Chemother. 1994 Sep;38(9):1909-14. doi: 10.1128/AAC.38.9.1909.


We constructed plasmid vectors that simultaneously express both the p66 and p51 subunits of human immunodeficiency virus type 1 (HIV-1) reverse transcriptase (RT) in Escherichia coli. These vectors allow us to generate HIV-1 RT heterodimers in which either the p66 or the p51 subunit has the wild-type sequence and the other subunit has a specific amino acid substitution. We used these vectors to express HIV-1 RT heterodimers containing several different amino acid substitutions reported to confer resistance to nonnucleoside inhibitors. Most of the amino acid substitutions conferred resistance to nonnucleoside inhibitors R86183 (TIBO) and TSAO-m3T only when present in the p66 subunit of the p66-p51 heterodimer; heterodimers that contained a wild-type p66 subunit and a mutant p51 subunit remained sensitive to the inhibitors. However, there was one mutation, E138K, that conferred drug resistance when the mutation was present in the p51 subunit. The corresponding heterodimer with the E138K mutation in the p66 subunit and a wild-type p51 subunit remained sensitive to the inhibitors. Analysis of the three-dimensional structure of HIV-1 RT indicated that residue 138 of the p51 subunit is in the nonnucleoside inhibitor-binding pocket while residue 138 of the p66 subunit is not. The mutagenesis results, combined with structural data, support the idea that the nonnucleoside inhibitors exert their effects by binding to a hydrophobic pocket in the RT heterodimer and that mutations which give rise to drug resistance directly interfere with the interactions between the nonnucleoside inhibitors and HIV-1 RT.

Publication types

  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Antiviral Agents / pharmacology*
  • Benzodiazepines / pharmacology*
  • Drug Resistance, Microbial
  • HIV Reverse Transcriptase
  • Imidazoles / pharmacology*
  • Macromolecular Substances
  • Mutation*
  • Plasmids / genetics
  • Protein Conformation
  • RNA-Directed DNA Polymerase / genetics*
  • Reverse Transcriptase Inhibitors*
  • Spiro Compounds / pharmacology*
  • Substrate Specificity
  • Thymidine / analogs & derivatives*
  • Thymidine / pharmacology


  • Antiviral Agents
  • Imidazoles
  • Macromolecular Substances
  • R 86183
  • Reverse Transcriptase Inhibitors
  • Spiro Compounds
  • Benzodiazepines
  • 1-(2',5'-bis-O-(tert-butyldimethylsilylribofuranosyl)-3-N-methylthymine)-3'-spiro-5''-(4''-amino-1'',2''-oxathiole-2'',2''-dioxide)
  • R-82913
  • HIV Reverse Transcriptase
  • RNA-Directed DNA Polymerase
  • Thymidine