Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My NCBI Filters

Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2012 1
2017 1
2021 1
2024 0

Text availability

Article attribute

Article type

Publication date

Search Results

3 results

Results by year

Filters applied: . Clear all
Page 1
PyMod 3: a complete suite for structural bioinformatics in PyMOL.
Janson G, Paiardini A. Janson G, et al. Bioinformatics. 2021 Jun 16;37(10):1471-1472. doi: 10.1093/bioinformatics/btaa849. Bioinformatics. 2021. PMID: 33010156
PyMod 2. Starting from the amino acid sequence of a target protein, users can take advantage of PyMod 3 to carry out all the steps of the homology modeling process (i.e. template searching, target-template sequence alignment, model building and quality assessment). …
PyMod 2. Starting from the amino acid sequence of a target protein, users can take advantage of PyMod 3 to carry out all the s …
PyMod 2.0: improvements in protein sequence-structure analysis and homology modeling within PyMOL.
Janson G, Zhang C, Prado MG, Paiardini A. Janson G, et al. Bioinformatics. 2017 Feb 1;33(3):444-446. doi: 10.1093/bioinformatics/btw638. Bioinformatics. 2017. PMID: 28158668
Here we describe the improvements introduced into the version 2.0 of PyMod. RESULTS: The original code of PyMod has been completely rewritten and improved in version 2.0 to extend PyMOL with packages such as Clustal Omega, PSIPRED and CAMPO. ...The open source code …
Here we describe the improvements introduced into the version 2.0 of PyMod. RESULTS: The original code of PyMod has been compl …
PyMod: sequence similarity searches, multiple sequence-structure alignments, and homology modeling within PyMOL.
Bramucci E, Paiardini A, Bossa F, Pascarella S. Bramucci E, et al. BMC Bioinformatics. 2012 Mar 28;13 Suppl 4(Suppl 4):S2. doi: 10.1186/1471-2105-13-S4-S2. BMC Bioinformatics. 2012. PMID: 22536966 Free PMC article.
Sequence similarity searches, multiple sequence and structural alignments generation and editing, and even the possibility to merge sequence and structure alignments have been implemented in PyMod, with the aim of creating a simple, yet powerful tool for sequence and struc …
Sequence similarity searches, multiple sequence and structural alignments generation and editing, and even the possibility to merge sequence …