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Integrative annotation of 21,037 human genes validated by full-length cDNA clones.
Imanishi T, Itoh T, Suzuki Y, O'Donovan C, Fukuchi S, Koyanagi KO, Barrero RA, Tamura T, Yamaguchi-Kabata Y, Tanino M, Yura K, Miyazaki S, Ikeo K, Homma K, Kasprzyk A, Nishikawa T, Hirakawa M, Thierry-Mieg J, Thierry-Mieg D, Ashurst J, Jia L, Nakao M, Thomas MA, Mulder N, Karavidopoulou Y, Jin L, Kim S, Yasuda T, Lenhard B, Eveno E, Suzuki Y, Yamasaki C, Takeda J, Gough C, Hilton P, Fujii Y, Sakai H, Tanaka S, Amid C, Bellgard M, Bonaldo Mde F, Bono H, Bromberg SK, Brookes AJ, Bruford E, Carninci P, Chelala C, Couillault C, de Souza SJ, Debily MA, Devignes MD, Dubchak I, Endo T, Estreicher A, Eyras E, Fukami-Kobayashi K, Gopinath GR, Graudens E, Hahn Y, Han M, Han ZG, Hanada K, Hanaoka H, Harada E, Hashimoto K, Hinz U, Hirai M, Hishiki T, Hopkinson I, Imbeaud S, Inoko H, Kanapin A, Kaneko Y, Kasukawa T, Kelso J, Kersey P, Kikuno R, Kimura K, Korn B, Kuryshev V, Makalowska I, Makino T, Mano S, Mariage-Samson R, Mashima J, Matsuda H, Mewes HW, Minoshima S, Nagai K, Nagasaki H, Nagata N, Nigam R, Ogasawara O, Ohara O, Ohtsubo M, Okada N, Okido T, Oota S, Ota M, Ota T, Otsuki T, Piatier-Tonneau D, Poustka A, Ren SX, Saitou N, Sakai K, Sakamoto S, Sakate R, Schupp I, Servant F, … See abstract for full author list ➔ Imanishi T, et al. Among authors: mewes hw. PLoS Biol. 2004 Jun;2(6):e162. doi: 10.1371/journal.pbio.0020162. Epub 2004 Apr 20. PLoS Biol. 2004. PMID: 15103394 Free PMC article.
The PEDANT genome database in 2005.
Riley ML, Schmidt T, Wagner C, Mewes HW, Frishman D. Riley ML, et al. Among authors: mewes hw. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D308-10. doi: 10.1093/nar/gki019. Nucleic Acids Res. 2005. PMID: 15608204 Free PMC article.
The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization.
Cuomo CA, Güldener U, Xu JR, Trail F, Turgeon BG, Di Pietro A, Walton JD, Ma LJ, Baker SE, Rep M, Adam G, Antoniw J, Baldwin T, Calvo S, Chang YL, Decaprio D, Gale LR, Gnerre S, Goswami RS, Hammond-Kosack K, Harris LJ, Hilburn K, Kennell JC, Kroken S, Magnuson JK, Mannhaupt G, Mauceli E, Mewes HW, Mitterbauer R, Muehlbauer G, Münsterkötter M, Nelson D, O'donnell K, Ouellet T, Qi W, Quesneville H, Roncero MI, Seong KY, Tetko IV, Urban M, Waalwijk C, Ward TJ, Yao J, Birren BW, Kistler HC. Cuomo CA, et al. Among authors: mewes hw. Science. 2007 Sep 7;317(5843):1400-2. doi: 10.1126/science.1143708. Science. 2007. PMID: 17823352
The PEDANT genome database.
Frishman D, Mokrejs M, Kosykh D, Kastenmüller G, Kolesov G, Zubrzycki I, Gruber C, Geier B, Kaps A, Albermann K, Volz A, Wagner C, Fellenberg M, Heumann K, Mewes HW. Frishman D, et al. Among authors: mewes hw. Nucleic Acids Res. 2003 Jan 1;31(1):207-11. doi: 10.1093/nar/gkg005. Nucleic Acids Res. 2003. PMID: 12519983 Free PMC article.
PEDANT genome database: 10 years online.
Riley ML, Schmidt T, Artamonova II, Wagner C, Volz A, Heumann K, Mewes HW, Frishman D. Riley ML, et al. Among authors: mewes hw. Nucleic Acids Res. 2007 Jan;35(Database issue):D354-7. doi: 10.1093/nar/gkl1005. Epub 2006 Dec 5. Nucleic Acids Res. 2007. PMID: 17148486 Free PMC article.
PEDANT covers all complete RefSeq genomes.
Walter MC, Rattei T, Arnold R, Güldener U, Münsterkötter M, Nenova K, Kastenmüller G, Tischler P, Wölling A, Volz A, Pongratz N, Jost R, Mewes HW, Frishman D. Walter MC, et al. Among authors: mewes hw. Nucleic Acids Res. 2009 Jan;37(Database issue):D408-11. doi: 10.1093/nar/gkn749. Epub 2008 Oct 21. Nucleic Acids Res. 2009. PMID: 18940859 Free PMC article.
Online genomics facilities in the new millennium.
Frishman D, Kaps A, Mewes HW. Frishman D, et al. Among authors: mewes hw. Pharmacogenomics. 2002 Mar;3(2):265-71. doi: 10.1517/14622416.3.2.265. Pharmacogenomics. 2002. PMID: 11972447 Review.
SNAPper: gene order predicts gene function.
Kolesov G, Mewes HW, Frishman D. Kolesov G, et al. Among authors: mewes hw. Bioinformatics. 2002 Jul;18(7):1017-9. doi: 10.1093/bioinformatics/18.7.1017. Bioinformatics. 2002. PMID: 12117803
The MIPS mammalian protein-protein interaction database.
Pagel P, Kovac S, Oesterheld M, Brauner B, Dunger-Kaltenbach I, Frishman G, Montrone C, Mark P, Stümpflen V, Mewes HW, Ruepp A, Frishman D. Pagel P, et al. Among authors: mewes hw. Bioinformatics. 2005 Mar;21(6):832-4. doi: 10.1093/bioinformatics/bti115. Epub 2004 Nov 5. Bioinformatics. 2005. PMID: 15531608
153 results