Thompson DK - Search Results

1

Global transcriptome analysis of the heat shock response of Shewanella oneidensis.

Gao H, Wang Y, Liu X, Yan T, Wu L, Alm E, Arkin A, Thompson DK, Zhou J. Gao H, et al. Among authors: thompson dk. J Bacteriol. 2004 Nov;186(22):7796-803. doi: 10.1128/JB.186.22.7796-7803.2004. J Bacteriol. 2004. PMID: 15516594 Free PMC article.

2

Microarray transcription profiling of a Shewanella oneidensis etrA mutant.

Beliaev AS, Thompson DK, Fields MW, Wu L, Lies DP, Nealson KH, Zhou J. Beliaev AS, et al. Among authors: thompson dk. J Bacteriol. 2002 Aug;184(16):4612-6. doi: 10.1128/JB.184.16.4612-4616.2002. J Bacteriol. 2002. PMID: 12142431 Free PMC article.

3

Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis.

Wan XF, Verberkmoes NC, McCue LA, Stanek D, Connelly H, Hauser LJ, Wu L, Liu X, Yan T, Leaphart A, Hettich RL, Zhou J, Thompson DK. Wan XF, et al. Among authors: thompson dk. J Bacteriol. 2004 Dec;186(24):8385-400. doi: 10.1128/JB.186.24.8385-8400.2004. J Bacteriol. 2004. PMID: 15576789 Free PMC article.

4

Transcriptome analysis of Shewanella oneidensis MR-1 in response to elevated salt conditions.

Liu Y, Gao W, Wang Y, Wu L, Liu X, Yan T, Alm E, Arkin A, Thompson DK, Fields MW, Zhou J. Liu Y, et al. Among authors: thompson dk. J Bacteriol. 2005 Apr;187(7):2501-7. doi: 10.1128/JB.187.7.2501-2507.2005. J Bacteriol. 2005. PMID: 15774893 Free PMC article.

5

Cellular response of Shewanella oneidensis to strontium stress.

Brown SD, Martin M, Deshpande S, Seal S, Huang K, Alm E, Yang Y, Wu L, Yan T, Liu X, Arkin A, Chourey K, Zhou J, Thompson DK. Brown SD, et al. Among authors: thompson dk. Appl Environ Microbiol. 2006 Jan;72(1):890-900. doi: 10.1128/AEM.72.1.890-900.2006. Appl Environ Microbiol. 2006. PMID: 16391131 Free PMC article.

6

Transcriptome profiling of Shewanella oneidensis gene expression following exposure to acidic and alkaline pH.

Leaphart AB, Thompson DK, Huang K, Alm E, Wan XF, Arkin A, Brown SD, Wu L, Yan T, Liu X, Wickham GS, Zhou J. Leaphart AB, et al. Among authors: thompson dk. J Bacteriol. 2006 Feb;188(4):1633-42. doi: 10.1128/JB.188.4.1633-1642.2006. J Bacteriol. 2006. PMID: 16452448 Free PMC article.

7

Global transcriptome analysis of the cold shock response of Shewanella oneidensis MR-1 and mutational analysis of its classical cold shock proteins.

Gao H, Yang ZK, Wu L, Thompson DK, Zhou J. Gao H, et al. Among authors: thompson dk. J Bacteriol. 2006 Jun;188(12):4560-9. doi: 10.1128/JB.01908-05. J Bacteriol. 2006. PMID: 16740962 Free PMC article.

8

A computational study of Shewanella oneidensis MR-1: structural prediction and functional inference of hypothetical proteins.

Yost C, Hauser L, Larimer F, Thompson D, Beliaev A, Zhou J, Xu Y, Xu D. Yost C, et al. OMICS. 2003 Summer;7(2):177-91. doi: 10.1089/153623103322246575. OMICS. 2003. PMID: 14506847

9

Transcriptional and proteomic analysis of a ferric uptake regulator (fur) mutant of Shewanella oneidensis: possible involvement of fur in energy metabolism, transcriptional regulation, and oxidative stress.

Thompson DK, Beliaev AS, Giometti CS, Tollaksen SL, Khare T, Lies DP, Nealson KH, Lim H, Yates J 3rd, Brandt CC, Tiedje JM, Zhou J. Thompson DK, et al. Appl Environ Microbiol. 2002 Feb;68(2):881-92. doi: 10.1128/AEM.68.2.881-892.2002. Appl Environ Microbiol. 2002. PMID: 11823232 Free PMC article.

10

Challenges in applying microarrays to environmental studies.

Zhou J, Thompson DK. Zhou J, et al. Among authors: thompson dk. Curr Opin Biotechnol. 2002 Jun;13(3):204-7. doi: 10.1016/s0958-1669(02)00319-1. Curr Opin Biotechnol. 2002. PMID: 12180093

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