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Allele effects in MHC-peptide interactions: a theoretical analysis of HLA-DRbeta1*0101-HA and HLA-DRbeta1*0401-HA complexes.
Biochem Biophys Res Commun. 2005 May 20;330(4):1162-7. doi: 10.1016/j.bbrc.2005.03.102.
Biochem Biophys Res Commun. 2005.
PMID: 15823565
Variations in the electrostatic landscape of class II human leukocyte antigen molecule induced by modifications in the myelin basic protein peptide: a theoretical approach.
Agudelo WA, Galindo JF, Ortiz M, Villaveces JL, Daza EE, Patarroyo ME.
Agudelo WA, et al. Among authors: villaveces jl.
PLoS One. 2009;4(1):e4164. doi: 10.1371/journal.pone.0004164. Epub 2009 Jan 9.
PLoS One. 2009.
PMID: 19132105
Free PMC article.
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Quantum chemical analysis explains hemagglutinin peptide-MHC Class II molecule HLA-DRbeta1*0101 interactions.
Cárdenas C, Villaveces JL, Bohórquez H, Llanos E, Suárez C, Obregón M, Patarroyo ME.
Cárdenas C, et al. Among authors: villaveces jl.
Biochem Biophys Res Commun. 2004 Oct 29;323(4):1265-77. doi: 10.1016/j.bbrc.2004.08.225.
Biochem Biophys Res Commun. 2004.
PMID: 15451434
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A comparative study of MHC Class-II HLA-DRbeta1*0401-Col II and HLA-DRbeta1*0101-HA complexes: a theoretical point of view.
Cárdenas C, Villaveces JL, Suárez C, Obregón M, Ortiz M, Patarroyo ME.
Cárdenas C, et al. Among authors: villaveces jl.
J Struct Biol. 2005 Jan;149(1):38-52. doi: 10.1016/j.jsb.2004.08.003.
J Struct Biol. 2005.
PMID: 15629656
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Wave function analysis of MHC-peptide interactions.
Cárdenas C, Obregón M, Balbín A, Villaveces JL, Patarroyo ME.
Cárdenas C, et al. Among authors: villaveces jl.
J Mol Graph Model. 2007 Jan;25(5):605-15. doi: 10.1016/j.jmgm.2006.04.005. Epub 2006 Apr 28.
J Mol Graph Model. 2007.
PMID: 16793298
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A theoretical analysis of HLA-DRbeta1*0301-CLIP complex using the first three multipolar moments of the electrostatic field.
Balbín A, Cárdenas C, Villaveces JL, Patarroyo ME.
Balbín A, et al. Among authors: villaveces jl.
Biochimie. 2006 Sep;88(9):1307-11. doi: 10.1016/j.biochi.2006.05.009. Epub 2006 Jun 22.
Biochimie. 2006.
PMID: 16872734
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Constructing a useful tool for characterizing amino acid conformers by means of quantum chemical and graph theory indices.
Cárdenas C, Obregón M, Llanos EJ, Machado E, Bohórquez HJ, Villaveces JL, Patarroyo ME.
Cárdenas C, et al. Among authors: villaveces jl.
Comput Chem. 2002 Nov;26(6):667-82. doi: 10.1016/s0097-8485(02)00052-9.
Comput Chem. 2002.
PMID: 12385481
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Topological study of the periodic system.
Restrepo G, Mesa H, Llanos EJ, Villaveces JL.
Restrepo G, et al. Among authors: villaveces jl.
J Chem Inf Comput Sci. 2004 Jan-Feb;44(1):68-75. doi: 10.1021/ci034217z.
J Chem Inf Comput Sci. 2004.
PMID: 14741012
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