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Whole-plant growth stage ontology for angiosperms and its application in plant biology.
Pujar A, Jaiswal P, Kellogg EA, Ilic K, Vincent L, Avraham S, Stevens P, Zapata F, Reiser L, Rhee SY, Sachs MM, Schaeffer M, Stein L, Ware D, McCouch S. Pujar A, et al. Among authors: kellogg ea. Plant Physiol. 2006 Oct;142(2):414-28. doi: 10.1104/pp.106.085720. Epub 2006 Aug 11. Plant Physiol. 2006. PMID: 16905665 Free PMC article.
The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations.
Avraham S, Tung CW, Ilic K, Jaiswal P, Kellogg EA, McCouch S, Pujar A, Reiser L, Rhee SY, Sachs MM, Schaeffer M, Stein L, Stevens P, Vincent L, Zapata F, Ware D. Avraham S, et al. Among authors: kellogg ea. Nucleic Acids Res. 2008 Jan;36(Database issue):D449-54. doi: 10.1093/nar/gkm908. Nucleic Acids Res. 2008. PMID: 18194960 Free PMC article.
Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages.
Jaiswal P, Avraham S, Ilic K, Kellogg EA, McCouch S, Pujar A, Reiser L, Rhee SY, Sachs MM, Schaeffer M, Stein L, Stevens P, Vincent L, Ware D, Zapata F. Jaiswal P, et al. Among authors: kellogg ea. Comp Funct Genomics. 2005;6(7-8):388-97. doi: 10.1002/cfg.496. Comp Funct Genomics. 2005. PMID: 18629207 Free PMC article.
A recommendation for naming transcription factor proteins in the grasses.
Gray J, Bevan M, Brutnell T, Buell CR, Cone K, Hake S, Jackson D, Kellogg E, Lawrence C, McCouch S, Mockler T, Moose S, Paterson A, Peterson T, Rokshar D, Souza GM, Springer N, Stein N, Timmermans M, Wang GL, Grotewold E. Gray J, et al. Plant Physiol. 2009 Jan;149(1):4-6. doi: 10.1104/pp.108.128504. Plant Physiol. 2009. PMID: 19126689 Free PMC article. No abstract available.
Phylogenomics and the rise of the angiosperms.
Zuntini AR, Carruthers T, Maurin O, Bailey PC, Leempoel K, Brewer GE, Epitawalage N, Françoso E, Gallego-Paramo B, McGinnie C, Negrão R, Roy SR, Simpson L, Toledo Romero E, Barber VMA, Botigué L, Clarkson JJ, Cowan RS, Dodsworth S, Johnson MG, Kim JT, Pokorny L, Wickett NJ, Antar GM, DeBolt L, Gutierrez K, Hendriks KP, Hoewener A, Hu AQ, Joyce EM, Kikuchi IABS, Larridon I, Larson DA, de Lírio EJ, Liu JX, Malakasi P, Przelomska NAS, Shah T, Viruel J, Allnutt TR, Ameka GK, Andrew RL, Appelhans MS, Arista M, Ariza MJ, Arroyo J, Arthan W, Bachelier JB, Bailey CD, Barnes HF, Barrett MD, Barrett RL, Bayer RJ, Bayly MJ, Biffin E, Biggs N, Birch JL, Bogarín D, Borosova R, Bowles AMC, Boyce PC, Bramley GLC, Briggs M, Broadhurst L, Brown GK, Bruhl JJ, Bruneau A, Buerki S, Burns E, Byrne M, Cable S, Calladine A, Callmander MW, Cano Á, Cantrill DJ, Cardinal-McTeague WM, Carlsen MM, Carruthers AJA, de Castro Mateo A, Chase MW, Chatrou LW, Cheek M, Chen S, Christenhusz MJM, Christin PA, Clements MA, Coffey SC, Conran JG, Cornejo X, Couvreur TLP, Cowie ID, Csiba L, Darbyshire I, Davidse G, Davies NMJ, Davis AP, van Dijk KJ, Downie SR, Duretto MF, Duvall MR, Edwards SL, Eggli U, Erkens RHJ, Escud… See abstract for full author list ➔ Zuntini AR, et al. Among authors: kellogg ea. Nature. 2024 May;629(8013):843-850. doi: 10.1038/s41586-024-07324-0. Epub 2024 Apr 24. Nature. 2024. PMID: 38658746 Free PMC article.
Setaria viridis: a model for C4 photosynthesis.
Brutnell TP, Wang L, Swartwood K, Goldschmidt A, Jackson D, Zhu XG, Kellogg E, Van Eck J. Brutnell TP, et al. Plant Cell. 2010 Aug;22(8):2537-44. doi: 10.1105/tpc.110.075309. Epub 2010 Aug 6. Plant Cell. 2010. PMID: 20693355 Free PMC article.
Taking the first steps towards a standard for reporting on phylogenies: Minimum Information About a Phylogenetic Analysis (MIAPA).
Leebens-Mack J, Vision T, Brenner E, Bowers JE, Cannon S, Clement MJ, Cunningham CW, dePamphilis C, deSalle R, Doyle JJ, Eisen JA, Gu X, Harshman J, Jansen RK, Kellogg EA, Koonin EV, Mishler BD, Philippe H, Pires JC, Qiu YL, Rhee SY, Sjölander K, Soltis DE, Soltis PS, Stevenson DW, Wall K, Warnow T, Zmasek C. Leebens-Mack J, et al. Among authors: kellogg ea. OMICS. 2006 Summer;10(2):231-7. doi: 10.1089/omi.2006.10.231. OMICS. 2006. PMID: 16901231 Free PMC article. Review.
131 results