Bhaskar A - Search Results

1

Computational detection of significant variation in binding affinity across two sets of sequences with application to the analysis of replication origins in yeast.

Keich U, Gao H, Garretson JS, Bhaskar A, Liachko I, Donato J, Tye BK. Keich U, et al. Among authors: bhaskar a. BMC Bioinformatics. 2008 Sep 12;9:372. doi: 10.1186/1471-2105-9-372. BMC Bioinformatics. 2008. PMID: 18786274 Free PMC article.

2

A comprehensive genome-wide map of autonomously replicating sequences in a naive genome.

Liachko I, Bhaskar A, Lee C, Chung SC, Tye BK, Keich U. Liachko I, et al. Among authors: bhaskar a. PLoS Genet. 2010 May 13;6(5):e1000946. doi: 10.1371/journal.pgen.1000946. PLoS Genet. 2010. PMID: 20485513 Free PMC article.

3

Confidently estimating the number of DNA replication origins.

Bhaskar A, Keich U. Bhaskar A, et al. Stat Appl Genet Mol Biol. 2010;9:Article28. doi: 10.2202/1544-6115.1544. Epub 2010 Jul 2. Stat Appl Genet Mol Biol. 2010. PMID: 20678076

4

Multi-locus match probability in a finite population: a fundamental difference between the Moran and Wright-Fisher models.

Bhaskar A, Song YS. Bhaskar A, et al. Bioinformatics. 2009 Jun 15;25(12):i187-95. doi: 10.1093/bioinformatics/btp227. Bioinformatics. 2009. PMID: 19477986 Free PMC article.

5

Novel probabilistic models of spatial genetic ancestry with applications to stratification correction in genome-wide association studies.

Bhaskar A, Javanmard A, Courtade TA, Tse D. Bhaskar A, et al. Bioinformatics. 2017 Mar 15;33(6):879-885. doi: 10.1093/bioinformatics/btw720. Bioinformatics. 2017. PMID: 28025204 Free PMC article.

We also develop an association test that uses the ancestry coordinates inferred by GAP to accurately account for ancestry-induced correlations in GWAS. Based on simulations and analysis of a dataset of 10 metabolic traits measured in a Northern Finland cohort, which …

We also develop an association test that uses the ancestry coordinates inferred by GAP to accurately account for ancestry-induced correlatio …

6

Mutation Rate Variation is a Primary Determinant of the Distribution of Allele Frequencies in Humans.

Harpak A, Bhaskar A, Pritchard JK. Harpak A, et al. Among authors: bhaskar a. PLoS Genet. 2016 Dec 15;12(12):e1006489. doi: 10.1371/journal.pgen.1006489. eCollection 2016 Dec. PLoS Genet. 2016. PMID: 27977673 Free PMC article.

7

CLOSED-FORM ASYMPTOTIC SAMPLING DISTRIBUTIONS UNDER THE COALESCENT WITH RECOMBINATION FOR AN ARBITRARY NUMBER OF LOCI.

Bhaskar A, Song YS. Bhaskar A, et al. Adv Appl Probab. 2012 Jun;44(2):391-407. doi: 10.1239/aap/1339878717. Adv Appl Probab. 2012. PMID: 22859863 Free PMC article.

8

Distortion of genealogical properties when the sample is very large.

Bhaskar A, Clark AG, Song YS. Bhaskar A, et al. Proc Natl Acad Sci U S A. 2014 Feb 11;111(6):2385-90. doi: 10.1073/pnas.1322709111. Epub 2014 Jan 27. Proc Natl Acad Sci U S A. 2014. PMID: 24469801 Free PMC article.

9

APPROXIMATE SAMPLING FORMULAS FOR GENERAL FINITE-ALLELES MODELS OF MUTATION.

Bhaskar A, Kamm JA, Song YS. Bhaskar A, et al. Adv Appl Probab. 2012 Jun;44(2):408-428. doi: 10.1239/aap/1339878718. Adv Appl Probab. 2012. PMID: 24634516 Free PMC article.

10

A NOVEL SPECTRAL METHOD FOR INFERRING GENERAL DIPLOID SELECTION FROM TIME SERIES GENETIC DATA.

Steinrücken M, Bhaskar A, Song YS. Steinrücken M, et al. Among authors: bhaskar a. Ann Appl Stat. 2014 Dec;8(4):2203-2222. doi: 10.1214/14-aoas764. Ann Appl Stat. 2014. PMID: 25598858 Free PMC article.

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