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Bioinformatics construction of the human cell surfaceome.
da Cunha JP, Galante PA, de Souza JE, de Souza RF, Carvalho PM, Ohara DT, Moura RP, Oba-Shinja SM, Marie SK, Silva WA Jr, Perez RO, Stransky B, Pieprzyk M, Moore J, Caballero O, Gama-Rodrigues J, Habr-Gama A, Kuo WP, Simpson AJ, Camargo AA, Old LJ, de Souza SJ. da Cunha JP, et al. Among authors: de souza rf, de souza sj, de souza je. Proc Natl Acad Sci U S A. 2009 Sep 29;106(39):16752-7. doi: 10.1073/pnas.0907939106. Epub 2009 Sep 15. Proc Natl Acad Sci U S A. 2009. PMID: 19805368 Free PMC article.
Distinct patterns of somatic alterations in a lymphoblastoid and a tumor genome derived from the same individual.
Galante PA, Parmigiani RB, Zhao Q, Caballero OL, de Souza JE, Navarro FC, Gerber AL, Nicolás MF, Salim AC, Silva AP, Edsall L, Devalle S, Almeida LG, Ye Z, Kuan S, Pinheiro DG, Tojal I, Pedigoni RG, de Sousa RG, Oliveira TY, de Paula MG, Ohno-Machado L, Kirkness EF, Levy S, da Silva WA Jr, Vasconcelos AT, Ren B, Zago MA, Strausberg RL, Simpson AJ, de Souza SJ, Camargo AA. Galante PA, et al. Among authors: de paula mg, de souza sj, de souza je, de sousa rg. Nucleic Acids Res. 2011 Aug;39(14):6056-68. doi: 10.1093/nar/gkr221. Epub 2011 Apr 14. Nucleic Acids Res. 2011. PMID: 21493686 Free PMC article.
ExInt: an Exon Intron Database.
Sakharkar M, Passetti F, de Souza JE, Long M, de Souza SJ. Sakharkar M, et al. Among authors: de souza sj, de souza je. Nucleic Acids Res. 2002 Jan 1;30(1):191-4. doi: 10.1093/nar/30.1.191. Nucleic Acids Res. 2002. PMID: 11752290 Free PMC article.
pp-Blast: a "pseudo-parallel" Blast.
Osório EC, de Souza JE, Zaiats AC, de Oliveira PS, de Souza SJ. Osório EC, et al. Among authors: de souza sj, de souza je, de oliveira ps. Braz J Med Biol Res. 2003 Apr;36(4):463-4. doi: 10.1590/s0100-879x2003000400007. Epub 2003 Apr 8. Braz J Med Biol Res. 2003. PMID: 12700823 Free article.
A genomic case study of desmoplastic small round cell tumor: comprehensive analysis reveals insights into potential therapeutic targets and development of a monitoring tool for a rare and aggressive disease.
Ferreira EN, Barros BD, de Souza JE, Almeida RV, Torrezan GT, Garcia S, Krepischi AC, Mello CA, Cunha IW, Pinto CA, Soares FA, Dias-Neto E, Lopes A, de Souza SJ, Carraro DM. Ferreira EN, et al. Among authors: de souza sj, de souza je. Hum Genomics. 2016 Nov 18;10(1):36. doi: 10.1186/s40246-016-0092-0. Hum Genomics. 2016. PMID: 27863505 Free PMC article.
65 results