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Tumor transcriptome sequencing reveals allelic expression imbalances associated with copy number alterations.
Tuch BB, Laborde RR, Xu X, Gu J, Chung CB, Monighetti CK, Stanley SJ, Olsen KD, Kasperbauer JL, Moore EJ, Broomer AJ, Tan R, Brzoska PM, Muller MW, Siddiqui AS, Asmann YW, Sun Y, Kuersten S, Barker MA, De La Vega FM, Smith DI. Tuch BB, et al. Among authors: kuersten s. PLoS One. 2010 Feb 19;5(2):e9317. doi: 10.1371/journal.pone.0009317. PLoS One. 2010. PMID: 20174472 Free PMC article.
Genomic analyses reveal broad impact of miR-137 on genes associated with malignant transformation and neuronal differentiation in glioblastoma cells.
Tamim S, Vo DT, Uren PJ, Qiao M, Bindewald E, Kasprzak WK, Shapiro BA, Nakaya HI, Burns SC, Araujo PR, Nakano I, Radek AJ, Kuersten S, Smith AD, Penalva LO. Tamim S, et al. Among authors: kuersten s. PLoS One. 2014 Jan 22;9(1):e85591. doi: 10.1371/journal.pone.0085591. eCollection 2014. PLoS One. 2014. PMID: 24465609 Free PMC article.
Translation regulation gets its 'omics' moment.
Kuersten S, Radek A, Vogel C, Penalva LO. Kuersten S, et al. Wiley Interdiscip Rev RNA. 2013 Nov-Dec;4(6):617-30. doi: 10.1002/wrna.1173. Epub 2013 May 15. Wiley Interdiscip Rev RNA. 2013. PMID: 23677826 Free PMC article. Review.
Widespread transcription at neuronal activity-regulated enhancers.
Kim TK, Hemberg M, Gray JM, Costa AM, Bear DM, Wu J, Harmin DA, Laptewicz M, Barbara-Haley K, Kuersten S, Markenscoff-Papadimitriou E, Kuhl D, Bito H, Worley PF, Kreiman G, Greenberg ME. Kim TK, et al. Among authors: kuersten s. Nature. 2010 May 13;465(7295):182-7. doi: 10.1038/nature09033. Epub 2010 Apr 14. Nature. 2010. PMID: 20393465 Free PMC article.
Deep-transcriptome and ribonome sequencing redefines the molecular networks of pluripotency and the extracellular space in human embryonic stem cells.
Kolle G, Shepherd JL, Gardiner B, Kassahn KS, Cloonan N, Wood DL, Nourbakhsh E, Taylor DF, Wani S, Chy HS, Zhou Q, McKernan K, Kuersten S, Laslett AL, Grimmond SM. Kolle G, et al. Among authors: kuersten s. Genome Res. 2011 Dec;21(12):2014-25. doi: 10.1101/gr.119321.110. Epub 2011 Oct 31. Genome Res. 2011. PMID: 22042643 Free PMC article.
MicroRNAs and their isomiRs function cooperatively to target common biological pathways.
Cloonan N, Wani S, Xu Q, Gu J, Lea K, Heater S, Barbacioru C, Steptoe AL, Martin HC, Nourbakhsh E, Krishnan K, Gardiner B, Wang X, Nones K, Steen JA, Matigian NA, Wood DL, Kassahn KS, Waddell N, Shepherd J, Lee C, Ichikawa J, McKernan K, Bramlett K, Kuersten S, Grimmond SM. Cloonan N, et al. Among authors: kuersten s. Genome Biol. 2011 Dec 30;12(12):R126. doi: 10.1186/gb-2011-12-12-r126. Genome Biol. 2011. PMID: 22208850 Free PMC article.
A simple and novel method for RNA-seq library preparation of single cell cDNA analysis by hyperactive Tn5 transposase.
Brouilette S, Kuersten S, Mein C, Bozek M, Terry A, Dias KR, Bhaw-Rosun L, Shintani Y, Coppen S, Ikebe C, Sawhney V, Campbell N, Kaneko M, Tano N, Ishida H, Suzuki K, Yashiro K. Brouilette S, et al. Among authors: kuersten s. Dev Dyn. 2012 Oct;241(10):1584-90. doi: 10.1002/dvdy.23850. Epub 2012 Aug 28. Dev Dyn. 2012. PMID: 22911638 Free article.
44 results