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Graph-based analysis of the metabolic exchanges between two co-resident intracellular symbionts, Baumannia cicadellinicola and Sulcia muelleri, with their insect host, Homalodisca coagulata.
Cottret L, Milreu PV, Acuña V, Marchetti-Spaccamela A, Stougie L, Charles H, Sagot MF. Cottret L, et al. Among authors: sagot mf. PLoS Comput Biol. 2010 Sep 2;6(9):e1000904. doi: 10.1371/journal.pcbi.1000904. PLoS Comput Biol. 2010. PMID: 20838465 Free PMC article.
CycADS: an annotation database system to ease the development and update of BioCyc databases.
Vellozo AF, Véron AS, Baa-Puyoulet P, Huerta-Cepas J, Cottret L, Febvay G, Calevro F, Rahbé Y, Douglas AE, Gabaldón T, Sagot MF, Charles H, Colella S. Vellozo AF, et al. Among authors: sagot mf. Database (Oxford). 2011 Apr 7;2011:bar008. doi: 10.1093/database/bar008. Print 2011. Database (Oxford). 2011. PMID: 21474551 Free PMC article.
Exploration of the core metabolism of symbiotic bacteria.
Klein CC, Cottret L, Kielbassa J, Charles H, Gautier C, Ribeiro de Vasconcelos AT, Lacroix V, Sagot MF. Klein CC, et al. Among authors: sagot mf. BMC Genomics. 2012 Aug 31;13:438. doi: 10.1186/1471-2164-13-438. BMC Genomics. 2012. PMID: 22938206 Free PMC article.
An introduction to metabolic networks and their structural analysis.
Lacroix V, Cottret L, Thébault P, Sagot MF. Lacroix V, et al. Among authors: sagot mf. IEEE/ACM Trans Comput Biol Bioinform. 2008 Oct-Dec;5(4):594-617. doi: 10.1109/TCBB.2008.79. IEEE/ACM Trans Comput Biol Bioinform. 2008. PMID: 18989046 Review.
Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure.
Milreu PV, Klein CC, Cottret L, Acuña V, Birmelé E, Borassi M, Junot C, Marchetti-Spaccamela A, Marino A, Stougie L, Jourdan F, Crescenzi P, Lacroix V, Sagot MF. Milreu PV, et al. Among authors: sagot mf. Bioinformatics. 2014 Jan 1;30(1):61-70. doi: 10.1093/bioinformatics/btt597. Epub 2013 Oct 27. Bioinformatics. 2014. PMID: 24167155 Free PMC article.
Genome sequence of the pea aphid Acyrthosiphon pisum.
International Aphid Genomics Consortium. International Aphid Genomics Consortium. PLoS Biol. 2010 Feb 23;8(2):e1000313. doi: 10.1371/journal.pbio.1000313. PLoS Biol. 2010. PMID: 20186266 Free PMC article.
89 results