Lyons E - Search Results

1

Using genomic sequencing for classical genetics in E. coli K12.

Lyons E, Freeling M, Kustu S, Inwood W. Lyons E, et al. PLoS One. 2011 Feb 25;6(2):e16717. doi: 10.1371/journal.pone.0016717. PLoS One. 2011. PMID: 21364914 Free PMC article.

2

How to usefully compare homologous plant genes and chromosomes as DNA sequences.

Lyons E, Freeling M. Lyons E, et al. Plant J. 2008 Feb;53(4):661-73. doi: 10.1111/j.1365-313X.2007.03326.x. Plant J. 2008. PMID: 18269575 Free article. Review.

3

Arabidopsis intragenomic conserved noncoding sequence.

Thomas BC, Rapaka L, Lyons E, Pedersen B, Freeling M. Thomas BC, et al. Among authors: lyons e. Proc Natl Acad Sci U S A. 2007 Feb 27;104(9):3348-53. doi: 10.1073/pnas.0611574104. Epub 2007 Feb 14. Proc Natl Acad Sci U S A. 2007. PMID: 17301222 Free PMC article.

4

Finding and comparing syntenic regions among Arabidopsis and the outgroups papaya, poplar, and grape: CoGe with rosids.

Lyons E, Pedersen B, Kane J, Alam M, Ming R, Tang H, Wang X, Bowers J, Paterson A, Lisch D, Freeling M. Lyons E, et al. Plant Physiol. 2008 Dec;148(4):1772-81. doi: 10.1104/pp.108.124867. Epub 2008 Oct 24. Plant Physiol. 2008. PMID: 18952863 Free PMC article.

5

The evolution of a high copy gene array in Arabidopsis.

Kane J, Freeling M, Lyons E. Kane J, et al. Among authors: lyons e. J Mol Evol. 2010 Jun;70(6):531-44. doi: 10.1007/s00239-010-9350-2. Epub 2010 May 22. J Mol Evol. 2010. PMID: 20495794 Free PMC article.

6

Screening synteny blocks in pairwise genome comparisons through integer programming.

Tang H, Lyons E, Pedersen B, Schnable JC, Paterson AH, Freeling M. Tang H, et al. Among authors: lyons e. BMC Bioinformatics. 2011 Apr 18;12:102. doi: 10.1186/1471-2105-12-102. BMC Bioinformatics. 2011. PMID: 21501495 Free PMC article.

7

Genome-wide analysis of syntenic gene deletion in the grasses.

Schnable JC, Freeling M, Lyons E. Schnable JC, et al. Among authors: lyons e. Genome Biol Evol. 2012;4(3):265-77. doi: 10.1093/gbe/evs009. Epub 2012 Jan 23. Genome Biol Evol. 2012. PMID: 22275519 Free PMC article.

8

Single-molecule sequencing of the desiccation-tolerant grass Oropetium thomaeum.

VanBuren R, Bryant D, Edger PP, Tang H, Burgess D, Challabathula D, Spittle K, Hall R, Gu J, Lyons E, Freeling M, Bartels D, Ten Hallers B, Hastie A, Michael TP, Mockler TC. VanBuren R, et al. Among authors: lyons e. Nature. 2015 Nov 26;527(7579):508-11. doi: 10.1038/nature15714. Epub 2015 Nov 11. Nature. 2015. PMID: 26560029

9

Many or most genes in Arabidopsis transposed after the origin of the order Brassicales.

Freeling M, Lyons E, Pedersen B, Alam M, Ming R, Lisch D. Freeling M, et al. Among authors: lyons e. Genome Res. 2008 Dec;18(12):1924-37. doi: 10.1101/gr.081026.108. Epub 2008 Oct 3. Genome Res. 2008. PMID: 18836034 Free PMC article.

10

G-boxes, bigfoot genes, and environmental response: characterization of intragenomic conserved noncoding sequences in Arabidopsis.

Freeling M, Rapaka L, Lyons E, Pedersen B, Thomas BC. Freeling M, et al. Among authors: lyons e. Plant Cell. 2007 May;19(5):1441-57. doi: 10.1105/tpc.107.050419. Epub 2007 May 11. Plant Cell. 2007. PMID: 17496117 Free PMC article.

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