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Genetic algorithms for simultaneous variable and sample selection in metabonomics.
Cavill R, Keun HC, Holmes E, Lindon JC, Nicholson JK, Ebbels TM. Cavill R, et al. Bioinformatics. 2009 Jan 1;25(1):112-8. doi: 10.1093/bioinformatics/btn586. Epub 2008 Nov 14. Bioinformatics. 2009. PMID: 19010803
AVAILABILITY: GA code available from http://www1.imperial.ac.uk/medicine/people/r.cavill/...
AVAILABILITY: GA code available from http://www1.imperial.ac.uk/medicine/people/r.cavill/...
Integrated pathway-level analysis of transcriptomics and metabolomics data with IMPaLA.
Kamburov A, Cavill R, Ebbels TM, Herwig R, Keun HC. Kamburov A, et al. Among authors: cavill r. Bioinformatics. 2011 Oct 15;27(20):2917-8. doi: 10.1093/bioinformatics/btr499. Epub 2011 Sep 4. Bioinformatics. 2011. PMID: 21893519
A web services programming interface is provided at http://impala.molgen.mpg.de/wsdoc. CONTACT: kamburov@molgen.mpg.de; r.cavill@imperial.ac.uk; h.keun@imperial.ac.uk SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online....
A web services programming interface is provided at http://impala.molgen.mpg.de/wsdoc. CONTACT: kamburov@molgen.mpg.de; r.cavill …
Proteomic and metabolomic responses to connexin43 silencing in primary hepatocyte cultures.
Vinken M, Maes M, Cavill R, Valkenborg D, Ellis JK, Decrock E, Leybaert L, Staes A, Gevaert K, Oliveira AG, Menezes GB, Cogliati B, Dagli ML, Ebbels TM, Witters E, Keun HC, Vanhaecke T, Rogiers V. Vinken M, et al. Among authors: cavill r. Arch Toxicol. 2013 May;87(5):883-94. doi: 10.1007/s00204-012-0994-0. Epub 2012 Dec 7. Arch Toxicol. 2013. PMID: 23224291
A combination of transcriptomics and metabolomics uncovers enhanced bile acid biosynthesis in HepG2 cells expressing CCAAT/enhancer-binding protein β (C/EBPβ), hepatocyte nuclear factor 4α (HNF4α), and constitutive androstane receptor (CAR).
Blazquez M, Carretero A, Ellis JK, Athersuch TJ, Cavill R, Ebbels TM, Keun HC, Castell JV, Lahoz A, Bort R. Blazquez M, et al. Among authors: cavill r. J Proteome Res. 2013 Jun 7;12(6):2732-41. doi: 10.1021/pr400085n. Epub 2013 May 15. J Proteome Res. 2013. PMID: 23641669
Delineation of the key aspects in the regulation of epithelial monolayer formation.
Aschauer L, Gruber LN, Pfaller W, Limonciel A, Athersuch TJ, Cavill R, Khan A, Gstraunthaler G, Grillari J, Grillari R, Hewitt P, Leonard MO, Wilmes A, Jennings P. Aschauer L, et al. Among authors: cavill r. Mol Cell Biol. 2013 Jul;33(13):2535-50. doi: 10.1128/MCB.01435-12. Epub 2013 Apr 22. Mol Cell Biol. 2013. PMID: 23608536 Free PMC article.
44 results