Banfield JF - Search Results

1

Improved genome annotation through untargeted detection of pathway-specific metabolites.

Bowen BP, Fischer CR, Baran R, Banfield JF, Northen T. Bowen BP, et al. Among authors: banfield jf. BMC Genomics. 2011 Jun 15;12 Suppl 1(Suppl 1):S6. doi: 10.1186/1471-2164-12-S1-S6. BMC Genomics. 2011. PMID: 21810208 Free PMC article.

2

Metabolome-proteome differentiation coupled to microbial divergence.

Wilmes P, Bowen BP, Thomas BC, Mueller RS, Denef VJ, VerBerkmoes NC, Hettich RL, Northen TR, Banfield JF. Wilmes P, et al. Among authors: banfield jf. mBio. 2010 Oct 26;1(5):e00246-10. doi: 10.1128/mBio.00246-10. mBio. 2010. PMID: 20978538 Free PMC article.

3

Quantitative tracking of isotope flows in proteomes of microbial communities.

Pan C, Fischer CR, Hyatt D, Bowen BP, Hettich RL, Banfield JF. Pan C, et al. Among authors: banfield jf. Mol Cell Proteomics. 2011 Apr;10(4):M110.006049. doi: 10.1074/mcp.M110.006049. Epub 2011 Feb 1. Mol Cell Proteomics. 2011. PMID: 21285414 Free PMC article.

4

Metabolites associated with adaptation of microorganisms to an acidophilic, metal-rich environment identified by stable-isotope-enabled metabolomics.

Mosier AC, Justice NB, Bowen BP, Baran R, Thomas BC, Northen TR, Banfield JF. Mosier AC, et al. Among authors: banfield jf. mBio. 2013 Mar 12;4(2):e00484-12. doi: 10.1128/mBio.00484-12. mBio. 2013. PMID: 23481603 Free PMC article.

5

Stable-isotope probing reveals that hydrogen isotope fractionation in proteins and lipids in a microbial community are different and species-specific.

Fischer CR, Bowen BP, Pan C, Northen TR, Banfield JF. Fischer CR, et al. Among authors: banfield jf. ACS Chem Biol. 2013 Aug 16;8(8):1755-63. doi: 10.1021/cb400210q. Epub 2013 Jun 5. ACS Chem Biol. 2013. PMID: 23713674

6

Proteogenomic analyses indicate bacterial methylotrophy and archaeal heterotrophy are prevalent below the grass root zone.

Butterfield CN, Li Z, Andeer PF, Spaulding S, Thomas BC, Singh A, Hettich RL, Suttle KB, Probst AJ, Tringe SG, Northen T, Pan C, Banfield JF. Butterfield CN, et al. Among authors: banfield jf. PeerJ. 2016 Nov 8;4:e2687. doi: 10.7717/peerj.2687. eCollection 2016. PeerJ. 2016. PMID: 27843720 Free PMC article.

7

Mediterranean grassland soil C-N compound turnover is dependent on rainfall and depth, and is mediated by genomically divergent microorganisms.

Diamond S, Andeer PF, Li Z, Crits-Christoph A, Burstein D, Anantharaman K, Lane KR, Thomas BC, Pan C, Northen TR, Banfield JF. Diamond S, et al. Among authors: banfield jf. Nat Microbiol. 2019 Aug;4(8):1356-1367. doi: 10.1038/s41564-019-0449-y. Epub 2019 May 20. Nat Microbiol. 2019. PMID: 31110364 Free PMC article.

8

Fine scale sampling reveals early differentiation of rhizosphere microbiome from bulk soil in young Brachypodium plant roots.

Acharya SM, Yee MO, Diamond S, Andeer PF, Baig NF, Aladesanmi OT, Northen TR, Banfield JF, Chakraborty R. Acharya SM, et al. Among authors: banfield jf. ISME Commun. 2023 Jun 6;3(1):54. doi: 10.1038/s43705-023-00265-1. ISME Commun. 2023. PMID: 37280433 Free PMC article.

9

Comparative genomics in acid mine drainage biofilm communities reveals metabolic and structural differentiation of co-occurring archaea.

Yelton AP, Comolli LR, Justice NB, Castelle C, Denef VJ, Thomas BC, Banfield JF. Yelton AP, et al. Among authors: banfield jf. BMC Genomics. 2013 Jul 17;14:485. doi: 10.1186/1471-2164-14-485. BMC Genomics. 2013. PMID: 23865623 Free PMC article.

10

Comparison of environmental and isolate Sulfobacillus genomes reveals diverse carbon, sulfur, nitrogen, and hydrogen metabolisms.

Justice NB, Norman A, Brown CT, Singh A, Thomas BC, Banfield JF. Justice NB, et al. Among authors: banfield jf. BMC Genomics. 2014 Dec 15;15:1107. doi: 10.1186/1471-2164-15-1107. BMC Genomics. 2014. PMID: 25511286 Free PMC article.

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