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Microscopic rearrangement of bound minor groove binders detected by NMR.
J Phys Chem B. 2012 May 17;116(19):5620-7. doi: 10.1021/jp301143e. Epub 2012 May 2.
J Phys Chem B. 2012.
PMID: 22530735
Free PMC article.
Out-of-shape DNA minor groove binders: induced fit interactions of heterocyclic dications with the DNA minor groove.
Miao Y, Lee MP, Parkinson GN, Batista-Parra A, Ismail MA, Neidle S, Boykin DW, Wilson WD.
Miao Y, et al. Among authors: batista parra a.
Biochemistry. 2005 Nov 15;44(45):14701-8. doi: 10.1021/bi051791q.
Biochemistry. 2005.
PMID: 16274217
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DNA minor groove induced dimerization of heterocyclic cations: compound structure, binding affinity, and specificity for a TTAA site.
Munde M, Kumar A, Nhili R, Depauw S, David-Cordonnier MH, Ismail MA, Stephens CE, Farahat AA, Batista-Parra A, Boykin DW, Wilson WD.
Munde M, et al. Among authors: batista parra a.
J Mol Biol. 2010 Oct 8;402(5):847-64. doi: 10.1016/j.jmb.2010.08.018. Epub 2010 Aug 14.
J Mol Biol. 2010.
PMID: 20713062
Free PMC article.
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Induced topological changes in DNA complexes: influence of DNA sequences and small molecule structures.
Hunt RA, Munde M, Kumar A, Ismail MA, Farahat AA, Arafa RK, Say M, Batista-Parra A, Tevis D, Boykin DW, Wilson WD.
Hunt RA, et al. Among authors: batista parra a.
Nucleic Acids Res. 2011 May;39(10):4265-74. doi: 10.1093/nar/gkq1362. Epub 2011 Jan 25.
Nucleic Acids Res. 2011.
PMID: 21266485
Free PMC article.
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Water-mediated binding of agents that target the DNA minor groove.
Liu Y, Kumar A, Depauw S, Nhili R, David-Cordonnier MH, Lee MP, Ismail MA, Farahat AA, Say M, Chackal-Catoen S, Batista-Parra A, Neidle S, Boykin DW, Wilson WD.
Liu Y, et al. Among authors: batista parra a.
J Am Chem Soc. 2011 Jul 6;133(26):10171-83. doi: 10.1021/ja202006u. Epub 2011 Jun 15.
J Am Chem Soc. 2011.
PMID: 21627167
Free PMC article.
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Dicationic near-linear biphenyl benzimidazole derivatives as DNA-targeted antiprotozoal agents.
Ismail MA, Batista-Parra A, Miao Y, Wilson WD, Wenzler T, Brun R, Boykin DW.
Ismail MA, et al. Among authors: batista parra a.
Bioorg Med Chem. 2005 Dec 15;13(24):6718-26. doi: 10.1016/j.bmc.2005.07.024. Epub 2005 Aug 15.
Bioorg Med Chem. 2005.
PMID: 16099661
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