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Neural-specific Sox2 input and differential Gli-binding affinity provide context and positional information in Shh-directed neural patterning.
Peterson KA, Nishi Y, Ma W, Vedenko A, Shokri L, Zhang X, McFarlane M, Baizabal JM, Junker JP, van Oudenaarden A, Mikkelsen T, Bernstein BE, Bailey TL, Bulyk ML, Wong WH, McMahon AP. Peterson KA, et al. Among authors: bailey tl. Genes Dev. 2012 Dec 15;26(24):2802-16. doi: 10.1101/gad.207142.112. Genes Dev. 2012. PMID: 23249739 Free PMC article.
Identification of molecular compartments and genetic circuitry in the developing mammalian kidney.
Yu J, Valerius MT, Duah M, Staser K, Hansard JK, Guo JJ, McMahon J, Vaughan J, Faria D, Georgas K, Rumballe B, Ren Q, Krautzberger AM, Junker JP, Thiagarajan RD, Machanick P, Gray PA, van Oudenaarden A, Rowitch DH, Stiles CD, Ma Q, Grimmond SM, Bailey TL, Little MH, McMahon AP. Yu J, et al. Among authors: bailey tl. Development. 2012 May;139(10):1863-73. doi: 10.1242/dev.074005. Development. 2012. PMID: 22510988 Free PMC article.
EMX1 regulates NRP1-mediated wiring of the mouse anterior cingulate cortex.
Lim JW, Donahoo AL, Bunt J, Edwards TJ, Fenlon LR, Liu Y, Zhou J, Moldrich RX, Piper M, Gobius I, Bailey TL, Wray NR, Kessaris N, Poo MM, Rubenstein JL, Richards LJ. Lim JW, et al. Among authors: bailey tl. Development. 2015 Nov 1;142(21):3746-57. doi: 10.1242/dev.119909. Development. 2015. PMID: 26534986 Free PMC article.
MEME-ChIP: motif analysis of large DNA datasets.
Machanick P, Bailey TL. Machanick P, et al. Among authors: bailey tl. Bioinformatics. 2011 Jun 15;27(12):1696-7. doi: 10.1093/bioinformatics/btr189. Epub 2011 Apr 12. Bioinformatics. 2011. PMID: 21486936 Free PMC article.
Inferring direct DNA binding from ChIP-seq.
Bailey TL, Machanick P. Bailey TL, et al. Nucleic Acids Res. 2012 Sep 1;40(17):e128. doi: 10.1093/nar/gks433. Epub 2012 May 18. Nucleic Acids Res. 2012. PMID: 22610855 Free PMC article.
142 results