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Genome-wide binding of MBD2 reveals strong preference for highly methylated loci.
Menafra R, Brinkman AB, Matarese F, Franci G, Bartels SJ, Nguyen L, Shimbo T, Wade PA, Hubner NC, Stunnenberg HG. Menafra R, et al. Among authors: shimbo t. PLoS One. 2014 Jun 13;9(6):e99603. doi: 10.1371/journal.pone.0099603. eCollection 2014. PLoS One. 2014. PMID: 24927503 Free PMC article.
Proteins That Read DNA Methylation.
Shimbo T, Wade PA. Shimbo T, et al. Adv Exp Med Biol. 2016;945:303-320. doi: 10.1007/978-3-319-43624-1_13. Adv Exp Med Biol. 2016. PMID: 27826844 Review.
Inhibition of histone binding by supramolecular hosts.
Allen HF, Daze KD, Shimbo T, Lai A, Musselman CA, Sims JK, Wade PA, Hof F, Kutateladze TG. Allen HF, et al. Among authors: shimbo t. Biochem J. 2014 May 1;459(3):505-12. doi: 10.1042/BJ20140145. Biochem J. 2014. PMID: 24576085 Free PMC article.
CHD4 and the NuRD complex directly control cardiac sarcomere formation.
Wilczewski CM, Hepperla AJ, Shimbo T, Wasson L, Robbe ZL, Davis IJ, Wade PA, Conlon FL. Wilczewski CM, et al. Among authors: shimbo t. Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):6727-6732. doi: 10.1073/pnas.1722219115. Epub 2018 Jun 11. Proc Natl Acad Sci U S A. 2018. PMID: 29891665 Free PMC article.
DNA methylation in mice is influenced by genetics as well as sex and life experience.
Grimm SA, Shimbo T, Takaku M, Thomas JW, Auerbach S, Bennett BD, Bucher JR, Burkholder AB, Day F, Du Y, Duncan CG, French JE, Foley JF, Li J, Merrick BA, Tice RR, Wang T, Xu X; NISC Comparative Sequencing Program; Bushel PR, Fargo DC, Mullikin JC, Wade PA. Grimm SA, et al. Among authors: shimbo t. Nat Commun. 2019 Jan 18;10(1):305. doi: 10.1038/s41467-018-08067-z. Nat Commun. 2019. PMID: 30659182 Free PMC article.
370 results