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Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases.
Meinhardt LW, Costa GG, Thomazella DP, Teixeira PJ, Carazzolle MF, Schuster SC, Carlson JE, Guiltinan MJ, Mieczkowski P, Farmer A, Ramaraj T, Crozier J, Davis RE, Shao J, Melnick RL, Pereira GA, Bailey BA. Meinhardt LW, et al. Among authors: ramaraj t. BMC Genomics. 2014 Feb 27;15:164. doi: 10.1186/1471-2164-15-164. BMC Genomics. 2014. PMID: 24571091 Free PMC article.
The transcriptome landscape of early maize meiosis.
Dukowic-Schulze S, Sundararajan A, Mudge J, Ramaraj T, Farmer AD, Wang M, Sun Q, Pillardy J, Kianian S, Retzel EF, Pawlowski WP, Chen C. Dukowic-Schulze S, et al. Among authors: ramaraj t. BMC Plant Biol. 2014 May 3;14:118. doi: 10.1186/1471-2229-14-118. BMC Plant Biol. 2014. PMID: 24885405 Free PMC article.
Correction to: The transcriptome landscape of early maize meiosis.
Dukowic-Schulze S, Sundararajan A, Mudge J, Ramaraj T, Farmer AD, Wang M, Sun Q, Pillardy J, Kianian S, Retzel EF, Pawlowski WP, Chen C. Dukowic-Schulze S, et al. Among authors: ramaraj t. BMC Plant Biol. 2018 Jan 15;18(1):12. doi: 10.1186/s12870-017-1224-y. BMC Plant Biol. 2018. PMID: 29334940 Free PMC article.
Hybrid assembly with long and short reads improves discovery of gene family expansions.
Miller JR, Zhou P, Mudge J, Gurtowski J, Lee H, Ramaraj T, Walenz BP, Liu J, Stupar RM, Denny R, Song L, Singh N, Maron LG, McCouch SR, McCombie WR, Schatz MC, Tiffin P, Young ND, Silverstein KAT. Miller JR, et al. Among authors: ramaraj t. BMC Genomics. 2017 Jul 19;18(1):541. doi: 10.1186/s12864-017-3927-8. BMC Genomics. 2017. PMID: 28724409 Free PMC article.
Augmenting Chinese hamster genome assembly by identifying regions of high confidence.
Vishwanathan N, Bandyopadhyay AA, Fu HY, Sharma M, Johnson KC, Mudge J, Ramaraj T, Onsongo G, Silverstein KA, Jacob NM, Le H, Karypis G, Hu WS. Vishwanathan N, et al. Among authors: ramaraj t. Biotechnol J. 2016 Sep;11(9):1151-7. doi: 10.1002/biot.201500455. Epub 2016 Jul 19. Biotechnol J. 2016. PMID: 27374913
49 results