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Toward more realistic drug-target interaction predictions.
Pahikkala T, Airola A, Pietilä S, Shakyawar S, Szwajda A, Tang J, Aittokallio T. Pahikkala T, et al. Brief Bioinform. 2015 Mar;16(2):325-37. doi: 10.1093/bib/bbu010. Epub 2014 Apr 9. Brief Bioinform. 2015. PMID: 24723570 Free PMC article.
Learning with multiple pairwise kernels for drug bioactivity prediction.
Cichonska A, Pahikkala T, Szedmak S, Julkunen H, Airola A, Heinonen M, Aittokallio T, Rousu J. Cichonska A, et al. Among authors: pahikkala t. Bioinformatics. 2018 Jul 1;34(13):i509-i518. doi: 10.1093/bioinformatics/bty277. Bioinformatics. 2018. PMID: 29949975 Free PMC article.
Identification of Functionally Related Enzymes by Learning-to-Rank Methods.
Stock M, Fober T, Hüllermeier E, Glinca S, Klebe G, Pahikkala T, Airola A, De Baets B, Waegeman W. Stock M, et al. Among authors: pahikkala t. IEEE/ACM Trans Comput Biol Bioinform. 2014 Nov-Dec;11(6):1157-69. doi: 10.1109/TCBB.2014.2338308. IEEE/ACM Trans Comput Biol Bioinform. 2014. PMID: 26357052
Modeling drug combination effects via latent tensor reconstruction.
Wang T, Szedmak S, Wang H, Aittokallio T, Pahikkala T, Cichonska A, Rousu J. Wang T, et al. Among authors: pahikkala t. Bioinformatics. 2021 Jul 12;37(Suppl_1):i93-i101. doi: 10.1093/bioinformatics/btab308. Bioinformatics. 2021. PMID: 34252952 Free PMC article.
Fast Kronecker Product Kernel Methods via Generalized Vec Trick.
Airola A, Pahikkala T. Airola A, et al. Among authors: pahikkala t. IEEE Trans Neural Netw Learn Syst. 2018 Aug;29(8):3374-3387. doi: 10.1109/TNNLS.2017.2727545. Epub 2017 Aug 1. IEEE Trans Neural Netw Learn Syst. 2018. PMID: 28783645
Adaptive risk prediction system with incremental and transfer learning.
Koivu A, Sairanen M, Airola A, Pahikkala T, Leung WC, Lo TK, Sahota DS. Koivu A, et al. Among authors: pahikkala t. Comput Biol Med. 2021 Nov;138:104886. doi: 10.1016/j.compbiomed.2021.104886. Epub 2021 Sep 23. Comput Biol Med. 2021. PMID: 34571438 Free article.
56 results