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ProteomeXchange provides globally coordinated proteomics data submission and dissemination.
Vizcaíno JA, Deutsch EW, Wang R, Csordas A, Reisinger F, Ríos D, Dianes JA, Sun Z, Farrah T, Bandeira N, Binz PA, Xenarios I, Eisenacher M, Mayer G, Gatto L, Campos A, Chalkley RJ, Kraus HJ, Albar JP, Martinez-Bartolomé S, Apweiler R, Omenn GS, Martens L, Jones AR, Hermjakob H. Vizcaíno JA, et al. Among authors: farrah t. Nat Biotechnol. 2014 Mar;32(3):223-6. doi: 10.1038/nbt.2839. Nat Biotechnol. 2014. PMID: 24727771 Free PMC article. No abstract available.
Tiered Human Integrated Sequence Search Databases for Shotgun Proteomics.
Deutsch EW, Sun Z, Campbell DS, Binz PA, Farrah T, Shteynberg D, Mendoza L, Omenn GS, Moritz RL. Deutsch EW, et al. Among authors: farrah t. J Proteome Res. 2016 Nov 4;15(11):4091-4100. doi: 10.1021/acs.jproteome.6b00445. Epub 2016 Sep 12. J Proteome Res. 2016. PMID: 27577934 Free PMC article.
A standardized framing for reporting protein identifications in mzIdentML 1.2.
Seymour SL, Farrah T, Binz PA, Chalkley RJ, Cottrell JS, Searle BC, Tabb DL, Vizcaíno JA, Prieto G, Uszkoreit J, Eisenacher M, Martínez-Bartolomé S, Ghali F, Jones AR. Seymour SL, et al. Among authors: farrah t. Proteomics. 2014 Nov;14(21-22):2389-99. doi: 10.1002/pmic.201400080. Epub 2014 Sep 23. Proteomics. 2014. PMID: 25092112 Free PMC article.
PASSEL: the PeptideAtlas SRMexperiment library.
Farrah T, Deutsch EW, Kreisberg R, Sun Z, Campbell DS, Mendoza L, Kusebauch U, Brusniak MY, Hüttenhain R, Schiess R, Selevsek N, Aebersold R, Moritz RL. Farrah T, et al. Proteomics. 2012 Apr;12(8):1170-5. doi: 10.1002/pmic.201100515. Proteomics. 2012. PMID: 22318887 Free PMC article.
A Bovine PeptideAtlas of milk and mammary gland proteomes.
Bislev SL, Deutsch EW, Sun Z, Farrah T, Aebersold R, Moritz RL, Bendixen E, Codrea MC. Bislev SL, et al. Among authors: farrah t. Proteomics. 2012 Sep;12(18):2895-9. doi: 10.1002/pmic.201200057. Proteomics. 2012. PMID: 22837157 Free PMC article.
64 results