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RecQ-core of BLM unfolds telomeric G-quadruplex in the absence of ATP.
Nucleic Acids Res. 2014 Oct;42(18):11528-45. doi: 10.1093/nar/gku856. Epub 2014 Sep 22.
Nucleic Acids Res. 2014.
PMID: 25245947
Free PMC article.
RPA-mediated unfolding of systematically varying G-quadruplex structures.
Ray S, Qureshi MH, Malcolm DW, Budhathoki JB, Celik U, Balci H.
Ray S, et al. Among authors: budhathoki jb.
Biophys J. 2013 May 21;104(10):2235-45. doi: 10.1016/j.bpj.2013.04.004.
Biophys J. 2013.
PMID: 23708363
Free PMC article.
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ATP-dependent G-quadruplex unfolding by Bloom helicase exhibits low processivity.
Budhathoki JB, Stafford EJ, Yodh JG, Balci H.
Budhathoki JB, et al.
Nucleic Acids Res. 2015 Jul 13;43(12):5961-70. doi: 10.1093/nar/gkv531. Epub 2015 May 18.
Nucleic Acids Res. 2015.
PMID: 25990739
Free PMC article.
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A Comparative Study of G-Quadruplex Unfolding and DNA Reeling Activities of Human RECQ5 Helicase.
Budhathoki JB, Maleki P, Roy WA, Janscak P, Yodh JG, Balci H.
Budhathoki JB, et al.
Biophys J. 2016 Jun 21;110(12):2585-2596. doi: 10.1016/j.bpj.2016.05.016.
Biophys J. 2016.
PMID: 27332117
Free PMC article.
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Quantifying the impact of small molecule ligands on G-quadruplex stability against Bloom helicase.
Maleki P, Mustafa G, Gyawali P, Budhathoki JB, Ma Y, Nagasawa K, Balci H.
Maleki P, et al. Among authors: budhathoki jb.
Nucleic Acids Res. 2019 Nov 18;47(20):10744-10753. doi: 10.1093/nar/gkz803.
Nucleic Acids Res. 2019.
PMID: 31544934
Free PMC article.
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A practical guide to studying G-quadruplex structures using single-molecule FRET.
Maleki P, Budhathoki JB, Roy WA, Balci H.
Maleki P, et al. Among authors: budhathoki jb.
Mol Genet Genomics. 2017 Jun;292(3):483-498. doi: 10.1007/s00438-017-1288-2. Epub 2017 Feb 1.
Mol Genet Genomics. 2017.
PMID: 28150040
Free PMC article.
Review.
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Three-dimensional, label-free cell viability measurements in tissue engineering scaffolds using optical coherence tomography.
Babakhanova G, Agrawal A, Arora D, Horenberg A, Budhathoki JB, Dunkers JP, Chalfoun J, Bajcsy P, Simon CG Jr.
Babakhanova G, et al. Among authors: budhathoki jb.
J Biomed Mater Res A. 2023 Aug;111(8):1279-1291. doi: 10.1002/jbm.a.37528. Epub 2023 Mar 14.
J Biomed Mater Res A. 2023.
PMID: 36916776
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Real-time observation of CRISPR spacer acquisition by Cas1-Cas2 integrase.
Budhathoki JB, Xiao Y, Schuler G, Hu C, Cheng A, Ding F, Ke A.
Budhathoki JB, et al.
Nat Struct Mol Biol. 2020 May;27(5):489-499. doi: 10.1038/s41594-020-0415-7. Epub 2020 May 4.
Nat Struct Mol Biol. 2020.
PMID: 32367067
Free PMC article.
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