Zubarev RA - Search Results

1

Functional Identification of Target by Expression Proteomics (FITExP) reveals protein targets and highlights mechanisms of action of small molecule drugs.

Chernobrovkin A, Marin-Vicente C, Visa N, Zubarev RA. Chernobrovkin A, et al. Among authors: zubarev ra. Sci Rep. 2015 Jun 8;5:11176. doi: 10.1038/srep11176. Sci Rep. 2015. PMID: 26052917 Free PMC article.

2

Proteomics and pathway analysis identifies JNK signaling as critical for high linear energy transfer radiation-induced apoptosis in non-small lung cancer cells.

Ståhl S, Fung E, Adams C, Lengqvist J, Mörk B, Stenerlöw B, Lewensohn R, Lehtiö J, Zubarev R, Viktorsson K. Ståhl S, et al. Mol Cell Proteomics. 2009 May;8(5):1117-29. doi: 10.1074/mcp.M800274-MCP200. Epub 2009 Jan 23. Mol Cell Proteomics. 2009. PMID: 19168796 Free PMC article.

3

The exosome associates cotranscriptionally with the nascent pre-mRNP through interactions with heterogeneous nuclear ribonucleoproteins.

Hessle V, Björk P, Sokolowski M, González de Valdivia E, Silverstein R, Artemenko K, Tyagi A, Maddalo G, Ilag L, Helbig R, Zubarev RA, Visa N. Hessle V, et al. Among authors: zubarev ra. Mol Biol Cell. 2009 Aug;20(15):3459-70. doi: 10.1091/mbc.e09-01-0079. Epub 2009 Jun 3. Mol Biol Cell. 2009. PMID: 19494042 Free PMC article.

4

Are the majority of a(2)-ions cyclic?

Good DM, Marin-Vicente C, Zubarev RA. Good DM, et al. Among authors: zubarev ra. Phys Chem Chem Phys. 2010 Nov 7;12(41):13372-4. doi: 10.1039/c0cp00514b. Epub 2010 Sep 20. Phys Chem Chem Phys. 2010. PMID: 20856953

5

ATP enhances neuronal differentiation of PC12 cells by activating PKCα interactions with cytoskeletal proteins.

Marín-Vicente C, Guerrero-Valero M, Nielsen ML, Savitski MM, Gómez-Fernández JC, Zubarev RA, Corbalán-García S. Marín-Vicente C, et al. Among authors: zubarev ra. J Proteome Res. 2011 Feb 4;10(2):529-40. doi: 10.1021/pr100742r. Epub 2010 Nov 18. J Proteome Res. 2011. PMID: 20973479

6

Drug target identification from protein dynamics using quantitative pathway analysis.

Good DM, Zubarev RA. Good DM, et al. Among authors: zubarev ra. J Proteome Res. 2011 May 6;10(5):2679-83. doi: 10.1021/pr200090m. Epub 2011 Apr 21. J Proteome Res. 2011. PMID: 21434696

7

The effects of 5-fluorouracil on the proteome of colon cancer cells.

Marin-Vicente C, Lyutvinskiy Y, Romans Fuertes P, Zubarev RA, Visa N. Marin-Vicente C, et al. Among authors: zubarev ra. J Proteome Res. 2013 Apr 5;12(4):1969-79. doi: 10.1021/pr400052p. Epub 2013 Mar 21. J Proteome Res. 2013. PMID: 23477467

8

In silico proteome-wide amino aCid and elemental composition (PACE) analysis of expression proteomics data provides a fingerprint of dominant metabolic processes.

Good DM, Mamdoh A, Budamgunta H, Zubarev RA. Good DM, et al. Among authors: zubarev ra. Genomics Proteomics Bioinformatics. 2013 Aug;11(4):219-29. doi: 10.1016/j.gpb.2013.07.002. Epub 2013 Aug 3. Genomics Proteomics Bioinformatics. 2013. PMID: 23917074 Free PMC article.

9

Detection of viral proteins in human cells lines by xeno-proteomics: elimination of the last valid excuse for not testing every cellular proteome dataset for viral proteins.

Chernobrovkin AL, Zubarev RA. Chernobrovkin AL, et al. Among authors: zubarev ra. PLoS One. 2014 Mar 11;9(3):e91433. doi: 10.1371/journal.pone.0091433. eCollection 2014. PLoS One. 2014. PMID: 24618588 Free PMC article.

10

DeMix workflow for efficient identification of cofragmented peptides in high resolution data-dependent tandem mass spectrometry.

Zhang B, Pirmoradian M, Chernobrovkin A, Zubarev RA. Zhang B, et al. Among authors: zubarev ra. Mol Cell Proteomics. 2014 Nov;13(11):3211-23. doi: 10.1074/mcp.O114.038877. Epub 2014 Aug 6. Mol Cell Proteomics. 2014. PMID: 25100859 Free PMC article.

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