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Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.
Hayashi T, Makino K, Ohnishi M, Kurokawa K, Ishii K, Yokoyama K, Han CG, Ohtsubo E, Nakayama K, Murata T, Tanaka M, Tobe T, Iida T, Takami H, Honda T, Sasakawa C, Ogasawara N, Yasunaga T, Kuhara S, Shiba T, Hattori M, Shinagawa H. Hayashi T, et al. Among authors: kurokawa k. DNA Res. 2001 Feb 28;8(1):11-22. doi: 10.1093/dnares/8.1.11. DNA Res. 2001. PMID: 11258796 Free article.
Genome sequence of an M3 strain of Streptococcus pyogenes reveals a large-scale genomic rearrangement in invasive strains and new insights into phage evolution.
Nakagawa I, Kurokawa K, Yamashita A, Nakata M, Tomiyasu Y, Okahashi N, Kawabata S, Yamazaki K, Shiba T, Yasunaga T, Hayashi H, Hattori M, Hamada S. Nakagawa I, et al. Among authors: kurokawa k. Genome Res. 2003 Jun;13(6A):1042-55. doi: 10.1101/gr.1096703. Genome Res. 2003. PMID: 12799345 Free PMC article.
The genome sequence of Clostridium botulinum type C neurotoxin-converting phage and the molecular mechanisms of unstable lysogeny.
Sakaguchi Y, Hayashi T, Kurokawa K, Nakayama K, Oshima K, Fujinaga Y, Ohnishi M, Ohtsubo E, Hattori M, Oguma K. Sakaguchi Y, et al. Among authors: kurokawa k. Proc Natl Acad Sci U S A. 2005 Nov 29;102(48):17472-7. doi: 10.1073/pnas.0505503102. Epub 2005 Nov 15. Proc Natl Acad Sci U S A. 2005. PMID: 16287978 Free PMC article.
Comparative metagenomics revealed commonly enriched gene sets in human gut microbiomes.
Kurokawa K, Itoh T, Kuwahara T, Oshima K, Toh H, Toyoda A, Takami H, Morita H, Sharma VK, Srivastava TP, Taylor TD, Noguchi H, Mori H, Ogura Y, Ehrlich DS, Itoh K, Takagi T, Sakaki Y, Hayashi T, Hattori M. Kurokawa K, et al. DNA Res. 2007 Aug 31;14(4):169-81. doi: 10.1093/dnares/dsm018. Epub 2007 Oct 3. DNA Res. 2007. PMID: 17916580 Free PMC article.
The Whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolution.
Nakayama K, Yamashita A, Kurokawa K, Morimoto T, Ogawa M, Fukuhara M, Urakami H, Ohnishi M, Uchiyama I, Ogura Y, Ooka T, Oshima K, Tamura A, Hattori M, Hayashi T. Nakayama K, et al. Among authors: kurokawa k. DNA Res. 2008 Aug;15(4):185-99. doi: 10.1093/dnares/dsn011. Epub 2008 May 28. DNA Res. 2008. PMID: 18508905 Free PMC article.
Systematic identification and sequence analysis of the genomic islands of the enteropathogenic Escherichia coli strain B171-8 by the combined use of whole-genome PCR scanning and fosmid mapping.
Ogura Y, Abe H, Katsura K, Kurokawa K, Asadulghani M, Iguchi A, Ooka T, Nakayama K, Yamashita A, Hattori M, Tobe T, Hayashi T. Ogura Y, et al. Among authors: kurokawa k. J Bacteriol. 2008 Nov;190(21):6948-60. doi: 10.1128/JB.00625-08. Epub 2008 Aug 29. J Bacteriol. 2008. PMID: 18757547 Free PMC article.
[The forefront of metagenomics].
Mori H, Hayashi T, Kurokawa K. Mori H, et al. Among authors: kurokawa k. Tanpakushitsu Kakusan Koso. 2009 Aug;54(10):1264-70. Tanpakushitsu Kakusan Koso. 2009. PMID: 19663253 Review. Japanese. No abstract available.
Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli.
Ogura Y, Ooka T, Iguchi A, Toh H, Asadulghani M, Oshima K, Kodama T, Abe H, Nakayama K, Kurokawa K, Tobe T, Hattori M, Hayashi T. Ogura Y, et al. Among authors: kurokawa k. Proc Natl Acad Sci U S A. 2009 Oct 20;106(42):17939-44. doi: 10.1073/pnas.0903585106. Epub 2009 Oct 6. Proc Natl Acad Sci U S A. 2009. PMID: 19815525 Free PMC article.
1,519 results