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Scalable and cost-effective NGS genotyping in the cloud.
Souilmi Y, Lancaster AK, Jung JY, Rizzo E, Hawkins JB, Powles R, Amzazi S, Ghazal H, Tonellato PJ, Wall DP. Souilmi Y, et al. Among authors: tonellato pj. BMC Med Genomics. 2015 Oct 15;8:64. doi: 10.1186/s12920-015-0134-9. BMC Med Genomics. 2015. PMID: 26470712 Free PMC article.
COSMOS: Python library for massively parallel workflows.
Gafni E, Luquette LJ, Lancaster AK, Hawkins JB, Jung JY, Souilmi Y, Wall DP, Tonellato PJ. Gafni E, et al. Among authors: tonellato pj. Bioinformatics. 2014 Oct 15;30(20):2956-8. doi: 10.1093/bioinformatics/btu385. Epub 2014 Jun 30. Bioinformatics. 2014. PMID: 24982428 Free PMC article.
Cloud computing for comparative genomics.
Wall DP, Kudtarkar P, Fusaro VA, Pivovarov R, Patil P, Tonellato PJ. Wall DP, et al. Among authors: tonellato pj. BMC Bioinformatics. 2010 May 18;11:259. doi: 10.1186/1471-2105-11-259. BMC Bioinformatics. 2010. PMID: 20482786 Free PMC article.
Genotator: a disease-agnostic tool for genetic annotation of disease.
Wall DP, Pivovarov R, Tong M, Jung JY, Fusaro VA, DeLuca TF, Tonellato PJ. Wall DP, et al. Among authors: tonellato pj. BMC Med Genomics. 2010 Oct 29;3:50. doi: 10.1186/1755-8794-3-50. BMC Med Genomics. 2010. PMID: 21034472 Free PMC article.
Biomedical cloud computing with Amazon Web Services.
Fusaro VA, Patil P, Gafni E, Wall DP, Tonellato PJ. Fusaro VA, et al. Among authors: tonellato pj. PLoS Comput Biol. 2011 Aug;7(8):e1002147. doi: 10.1371/journal.pcbi.1002147. Epub 2011 Aug 25. PLoS Comput Biol. 2011. PMID: 21901085 Free PMC article.
Streaming support for data intensive cloud-based sequence analysis.
Issa SA, Kienzler R, El-Kalioby M, Tonellato PJ, Wall D, Bruggmann R, Abouelhoda M. Issa SA, et al. Among authors: tonellato pj. Biomed Res Int. 2013;2013:791051. doi: 10.1155/2013/791051. Epub 2013 Apr 24. Biomed Res Int. 2013. PMID: 23710461 Free PMC article.
Deriving clinical action from whole-genome analysis.
Wall DP, Tonellato PJ. Wall DP, et al. Among authors: tonellato pj. Per Med. 2012 May;9(3):247-252. doi: 10.2217/pme.12.32. Per Med. 2012. PMID: 29758797 No abstract available.
78 results