Raviram R - Search Results

1

4C-ker: A Method to Reproducibly Identify Genome-Wide Interactions Captured by 4C-Seq Experiments.

Raviram R, Rocha PP, Müller CL, Miraldi ER, Badri S, Fu Y, Swanzey E, Proudhon C, Snetkova V, Bonneau R, Skok JA. Raviram R, et al. PLoS Comput Biol. 2016 Mar 3;12(3):e1004780. doi: 10.1371/journal.pcbi.1004780. eCollection 2016 Mar. PLoS Comput Biol. 2016. PMID: 26938081 Free PMC article.

2

Interpreting 4C-Seq data: how far can we go?

Raviram R, Rocha PP, Bonneau R, Skok JA. Raviram R, et al. Epigenomics. 2014;6(5):455-7. doi: 10.2217/epi.14.47. Epigenomics. 2014. PMID: 25431936 Free PMC article. No abstract available.

3

CTCF establishes discrete functional chromatin domains at the Hox clusters during differentiation.

Narendra V, Rocha PP, An D, Raviram R, Skok JA, Mazzoni EO, Reinberg D. Narendra V, et al. Among authors: raviram r. Science. 2015 Feb 27;347(6225):1017-21. doi: 10.1126/science.1262088. Science. 2015. PMID: 25722416 Free PMC article.

4

Breaking TADs: insights into hierarchical genome organization.

Rocha PP, Raviram R, Bonneau R, Skok JA. Rocha PP, et al. Among authors: raviram r. Epigenomics. 2015;7(4):523-6. doi: 10.2217/epi.15.25. Epigenomics. 2015. PMID: 26111025 Free PMC article. Review. No abstract available.

5

Cohesin loss alters adult hematopoietic stem cell homeostasis, leading to myeloproliferative neoplasms.

Mullenders J, Aranda-Orgilles B, Lhoumaud P, Keller M, Pae J, Wang K, Kayembe C, Rocha PP, Raviram R, Gong Y, Premsrirut PK, Tsirigos A, Bonneau R, Skok JA, Cimmino L, Hoehn D, Aifantis I. Mullenders J, et al. Among authors: raviram r. J Exp Med. 2015 Oct 19;212(11):1833-50. doi: 10.1084/jem.20151323. Epub 2015 Oct 5. J Exp Med. 2015. PMID: 26438359 Free PMC article.

6

Long-Range Regulation of V(D)J Recombination.

Proudhon C, Hao B, Raviram R, Chaumeil J, Skok JA. Proudhon C, et al. Among authors: raviram r. Adv Immunol. 2015;128:123-82. doi: 10.1016/bs.ai.2015.07.003. Epub 2015 Aug 20. Adv Immunol. 2015. PMID: 26477367 Free PMC article. Review.

7

Mediator facilitates transcriptional activation and dynamic long-range contacts at the IgH locus during class switch recombination.

Thomas-Claudepierre AS, Robert I, Rocha PP, Raviram R, Schiavo E, Heyer V, Bonneau R, Luo VM, Reddy JK, Borggrefe T, Skok JA, Reina-San-Martin B. Thomas-Claudepierre AS, et al. Among authors: raviram r. J Exp Med. 2016 Mar 7;213(3):303-12. doi: 10.1084/jem.20141967. Epub 2016 Feb 22. J Exp Med. 2016. PMID: 26903242 Free PMC article.

8

CRISPR-dCas9 and sgRNA scaffolds enable dual-colour live imaging of satellite sequences and repeat-enriched individual loci.

Fu Y, Rocha PP, Luo VM, Raviram R, Deng Y, Mazzoni EO, Skok JA. Fu Y, et al. Among authors: raviram r. Nat Commun. 2016 May 25;7:11707. doi: 10.1038/ncomms11707. Nat Commun. 2016. PMID: 27222091 Free PMC article.

9

Active and Inactive Enhancers Cooperate to Exert Localized and Long-Range Control of Gene Regulation.

Proudhon C, Snetkova V, Raviram R, Lobry C, Badri S, Jiang T, Hao B, Trimarchi T, Kluger Y, Aifantis I, Bonneau R, Skok JA. Proudhon C, et al. Among authors: raviram r. Cell Rep. 2016 Jun 7;15(10):2159-2169. doi: 10.1016/j.celrep.2016.04.087. Epub 2016 May 26. Cell Rep. 2016. PMID: 27239026 Free PMC article.

10

A Damage-Independent Role for 53BP1 that Impacts Break Order and Igh Architecture during Class Switch Recombination.

Rocha PP, Raviram R, Fu Y, Kim J, Luo VM, Aljoufi A, Swanzey E, Pasquarella A, Balestrini A, Miraldi ER, Bonneau R, Petrini J, Schotta G, Skok JA. Rocha PP, et al. Among authors: raviram r. Cell Rep. 2016 Jun 28;16(1):48-55. doi: 10.1016/j.celrep.2016.05.073. Epub 2016 Jun 16. Cell Rep. 2016. PMID: 27320916 Free PMC article.

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