Nyman TA - Search Results

1

Phosphoproteomics to Characterize Host Response During Influenza A Virus Infection of Human Macrophages.

Söderholm S, Kainov DE, Öhman T, Denisova OV, Schepens B, Kulesskiy E, Imanishi SY, Corthals G, Hintsanen P, Aittokallio T, Saelens X, Matikainen S, Nyman TA. Söderholm S, et al. Among authors: nyman ta. Mol Cell Proteomics. 2016 Oct;15(10):3203-3219. doi: 10.1074/mcp.M116.057984. Epub 2016 Aug 2. Mol Cell Proteomics. 2016. PMID: 27486199 Free PMC article.

2

Proteome analysis reveals ubiquitin-conjugating enzymes to be a new family of interferon-alpha-regulated genes.

Nyman TA, Matikainen S, Sareneva T, Julkunen I, Kalkkinen N. Nyman TA, et al. Eur J Biochem. 2000 Jul;267(13):4011-9. doi: 10.1046/j.1432-1327.2000.01433.x. Eur J Biochem. 2000. PMID: 10866800 Free article.

3

Hierarchical grid transformation for image warping in the analysis of two-dimensional electrophoresis gels.

Salmi J, Aittokallio T, Westerholm J, Griese M, Rosengren A, Nyman TA, Lahesmaa R, Nevalainen O. Salmi J, et al. Among authors: nyman ta. Proteomics. 2002 Nov;2(11):1504-15. doi: 10.1002/1615-9861(200211)2:11<1504::AID-PROT1504>3.0.CO;2-B. Proteomics. 2002. PMID: 12442250

4

Comparison of PDQuest and Progenesis software packages in the analysis of two-dimensional electrophoresis gels.

Rosengren AT, Salmi JM, Aittokallio T, Westerholm J, Lahesmaa R, Nyman TA, Nevalainen OS. Rosengren AT, et al. Among authors: nyman ta. Proteomics. 2003 Oct;3(10):1936-46. doi: 10.1002/pmic.200300544. Proteomics. 2003. PMID: 14625856

5

Geometrical distortions in two-dimensional gels: applicable correction methods.

Aittokallio T, Salmi J, Nyman TA, Nevalainen OS. Aittokallio T, et al. Among authors: nyman ta. J Chromatogr B Analyt Technol Biomed Life Sci. 2005 Feb 5;815(1-2):25-37. doi: 10.1016/j.jchromb.2004.07.037. J Chromatogr B Analyt Technol Biomed Life Sci. 2005. PMID: 15652796 Review.

6

Proteomic and transcriptomic characterization of interferon-alpha-induced human primary T helper cells.

Rosengren AT, Nyman TA, Syyrakki S, Matikainen S, Lahesmaa R. Rosengren AT, et al. Among authors: nyman ta. Proteomics. 2005 Feb;5(2):371-9. doi: 10.1002/pmic.200400967. Proteomics. 2005. PMID: 15700245

7

Proteome characterization of human NK-92 cells identifies novel IFN-alpha and IL-15 target genes.

Rakkola R, Matikainen S, Nyman TA. Rakkola R, et al. Among authors: nyman ta. J Proteome Res. 2005 Jan-Feb;4(1):75-82. doi: 10.1021/pr049857b. J Proteome Res. 2005. PMID: 15707360

8

A comparative evaluation of software for the analysis of liquid chromatography-tandem mass spectrometry data from isotope coded affinity tag experiments.

Moulder R, Filén JJ, Salmi J, Katajamaa M, Nevalainen OS, Oresic M, Aittokallio T, Lahesmaa R, Nyman TA. Moulder R, et al. Among authors: nyman ta. Proteomics. 2005 Jul;5(11):2748-60. doi: 10.1002/pmic.200401187. Proteomics. 2005. PMID: 15952233

9

Proteome profiling of interleukin-12 treated human T helper cells.

Rosengren AT, Nyman TA, Lahesmaa R. Rosengren AT, et al. Among authors: nyman ta. Proteomics. 2005 Aug;5(12):3137-41. doi: 10.1002/pmic.200401151. Proteomics. 2005. PMID: 16038020

10

Quality classification of tandem mass spectrometry data.

Salmi J, Moulder R, Filén JJ, Nevalainen OS, Nyman TA, Lahesmaa R, Aittokallio T. Salmi J, et al. Among authors: nyman ta. Bioinformatics. 2006 Feb 15;22(4):400-6. doi: 10.1093/bioinformatics/bti829. Epub 2005 Dec 13. Bioinformatics. 2006. PMID: 16352652

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