Proost S - Search Results

1

Phylogenomic analysis of gene co-expression networks reveals the evolution of functional modules.

Ruprecht C, Proost S, Hernandez-Coronado M, Ortiz-Ramirez C, Lang D, Rensing SA, Becker JD, Vandepoele K, Mutwil M. Ruprecht C, et al. Among authors: proost s. Plant J. 2017 May;90(3):447-465. doi: 10.1111/tpj.13502. Epub 2017 Mar 23. Plant J. 2017. PMID: 28161902 Free article.

2

Tools of the trade: studying molecular networks in plants.

Proost S, Mutwil M. Proost S, et al. Curr Opin Plant Biol. 2016 Apr;30:143-50. doi: 10.1016/j.pbi.2016.02.010. Epub 2016 Mar 15. Curr Opin Plant Biol. 2016. PMID: 26990519 Review.

3

PlaNet: Comparative Co-Expression Network Analyses for Plants.

Proost S, Mutwil M. Proost S, et al. Methods Mol Biol. 2017;1533:213-227. doi: 10.1007/978-1-4939-6658-5_12. Methods Mol Biol. 2017. PMID: 27987173

4

Beyond Genomics: Studying Evolution with Gene Coexpression Networks.

Ruprecht C, Vaid N, Proost S, Persson S, Mutwil M. Ruprecht C, et al. Among authors: proost s. Trends Plant Sci. 2017 Apr;22(4):298-307. doi: 10.1016/j.tplants.2016.12.011. Epub 2017 Jan 23. Trends Plant Sci. 2017. PMID: 28126286 Review.

5

Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co-expression.

De Bodt S, Proost S, Vandepoele K, Rouzé P, Van de Peer Y. De Bodt S, et al. Among authors: proost s. BMC Genomics. 2009 Jun 29;10:288. doi: 10.1186/1471-2164-10-288. BMC Genomics. 2009. PMID: 19563678 Free PMC article.

6

The flowering world: a tale of duplications.

Van de Peer Y, Fawcett JA, Proost S, Sterck L, Vandepoele K. Van de Peer Y, et al. Among authors: proost s. Trends Plant Sci. 2009 Dec;14(12):680-8. doi: 10.1016/j.tplants.2009.09.001. Epub 2009 Oct 7. Trends Plant Sci. 2009. PMID: 19818673 Review.

7

PLAZA: a comparative genomics resource to study gene and genome evolution in plants.

Proost S, Van Bel M, Sterck L, Billiau K, Van Parys T, Van de Peer Y, Vandepoele K. Proost S, et al. Plant Cell. 2009 Dec;21(12):3718-31. doi: 10.1105/tpc.109.071506. Epub 2009 Dec 29. Plant Cell. 2009. PMID: 20040540 Free PMC article.

8

Dissecting plant genomes with the PLAZA comparative genomics platform.

Van Bel M, Proost S, Wischnitzki E, Movahedi S, Scheerlinck C, Van de Peer Y, Vandepoele K. Van Bel M, et al. Among authors: proost s. Plant Physiol. 2012 Feb;158(2):590-600. doi: 10.1104/pp.111.189514. Epub 2011 Dec 23. Plant Physiol. 2012. PMID: 22198273 Free PMC article.

9

LSTrAP: efficiently combining RNA sequencing data into co-expression networks.

Proost S, Krawczyk A, Mutwil M. Proost S, et al. BMC Bioinformatics. 2017 Oct 10;18(1):444. doi: 10.1186/s12859-017-1861-z. BMC Bioinformatics. 2017. PMID: 29017446 Free PMC article.

10

PhytoNet: comparative co-expression network analyses across phytoplankton and land plants.

Ferrari C, Proost S, Ruprecht C, Mutwil M. Ferrari C, et al. Among authors: proost s. Nucleic Acids Res. 2018 Jul 2;46(W1):W76-W83. doi: 10.1093/nar/gky298. Nucleic Acids Res. 2018. PMID: 29718316 Free PMC article.

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