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dgfr: an R package to assess sequence diversity of gene families.
Almeida LV, Reis-Cunha JL, Bartholomeu DC. Almeida LV, et al. Among authors: bartholomeu dc. BMC Bioinformatics. 2024 Jun 6;25(1):207. doi: 10.1186/s12859-024-05826-2. BMC Bioinformatics. 2024. PMID: 38844845 Free PMC article.
Ancestral aneuploidy and stable chromosomal duplication resulting in differential genome structure and gene expression control in trypanosomatid parasites.
Reis-Cunha JL, Pimenta-Carvalho SA, Almeida LV, Coqueiro-Dos-Santos A, Marques CA, Black JA, Damasceno J, McCulloch R, Bartholomeu DC, Jeffares DC. Reis-Cunha JL, et al. Among authors: bartholomeu dc. Genome Res. 2024 Apr 25;34(3):441-453. doi: 10.1101/gr.278550.123. Genome Res. 2024. PMID: 38604731 Free PMC article.
Prison as a driver of recent transmissions of multidrug-resistant tuberculosis in Callao, Peru: a cross-sectional study.
Utpatel C, Zavaleta M, Rojas-Bolivar D, Mühlbach A, Picoy J, Portugal W, Esteve-Solé A, Alsina L, Miotto P, Bartholomeu DC, Sanchez J, Cuadros DF, Alarcon JO, Niemann S, Huaman MA. Utpatel C, et al. Among authors: bartholomeu dc. Lancet Reg Health Am. 2024 Jan 20;31:100674. doi: 10.1016/j.lana.2024.100674. eCollection 2024 Mar. Lancet Reg Health Am. 2024. PMID: 38500964 Free PMC article.
Immunogenic mapping of rDyn-1 and rKDDR-plus proteins and selection of oligopeptides by immunoblotting for the diagnosis of Leishmania infantum-infected dogs.
Siqueira WF, Cardoso MS, Fraga VG, Ottino J, Ribeiro VM, Gondim CN, de Paiva Barçante JM, Amado Gomes AC, Galdino AS, Eersels K, van Grinsven B, Bartholomeu DC, Bueno LL, Cleij T, Fujiwara RT. Siqueira WF, et al. Among authors: bartholomeu dc. PLoS Negl Trop Dis. 2023 Aug 4;17(8):e0011535. doi: 10.1371/journal.pntd.0011535. eCollection 2023 Aug. PLoS Negl Trop Dis. 2023. PMID: 37540724 Free PMC article.
Complete assembly, annotation of virulence genes and CRISPR editing of the genome of Leishmania amazonensis PH8 strain.
Goes WM, Brasil CRF, Reis-Cunha JL, Coqueiro-Dos-Santos A, Grazielle-Silva V, de Souza Reis J, Souto TC, Laranjeira-Silva MF, Bartholomeu DC, Fernandes AP, Teixeira SMR. Goes WM, et al. Among authors: bartholomeu dc. Genomics. 2023 Sep;115(5):110661. doi: 10.1016/j.ygeno.2023.110661. Epub 2023 May 30. Genomics. 2023. PMID: 37263313 Free article.
Evasion of the complement system by Leishmania through the uptake of C4bBP, a complement regulatory protein, and probably by the action of GP63 on C4b molecules deposited on parasite surface.
Pereira-Filho AA, Queiroz DC, Saab NAA, D'Ávila Pessoa GC, Koerich LB, Pereira MH, Sant'Anna MRV, Araújo RN, Bartholomeu DC, Gontijo NF. Pereira-Filho AA, et al. Among authors: bartholomeu dc. Acta Trop. 2023 Jun;242:106908. doi: 10.1016/j.actatropica.2023.106908. Epub 2023 Mar 22. Acta Trop. 2023. PMID: 36963597
Serodiagnosis of leishmaniasis in asymptomatic and symptomatic dogs by use of the recombinant dynamin-1-like protein from Leishmania infantum: A preliminary study.
Siqueira WF, Cardoso MS, Clímaco MC, Silva ALT, Heidt B, Eersels K, van Grinsven B, Bartholomeu DC, Bueno LL, Cleij T, Fujiwara RT. Siqueira WF, et al. Among authors: bartholomeu dc. Acta Trop. 2023 Mar;239:106827. doi: 10.1016/j.actatropica.2023.106827. Epub 2023 Jan 5. Acta Trop. 2023. PMID: 36610530
Chagas cardiomyopathy is associated with a high susceptibility to T. cruzi infection in monocyte-derived macrophages and a predominance of CD4+CD45RO+ T-cells with immunoregulatory patterns.
Carvalho AMRS, Ferraz IA, Hojo-Souza NS, Medeiros FAC, Viana LA, Bartholomeu DC, Chaves AT, de Souza TM, Costa E Silva MF, Mendes TAO, Duarte MC, Rocha MODC, Menezes-Souza D. Carvalho AMRS, et al. Among authors: bartholomeu dc. Acta Trop. 2023 Jan;237:106749. doi: 10.1016/j.actatropica.2022.106749. Epub 2022 Nov 10. Acta Trop. 2023. PMID: 36370753 Free article.
Accessing the Variability of Multicopy Genes in Complex Genomes using Unassembled Next-Generation Sequencing Reads: The Case of Trypanosoma cruzi Multigene Families.
Reis-Cunha JL, Coqueiro-Dos-Santos A, Pimenta-Carvalho SA, Marques LP, Rodrigues-Luiz GF, Baptista RP, Almeida LV, Honorato NRM, Lobo FP, Fraga VG, Galvão LMDC, Bueno LL, Fujiwara RT, Cardoso MS, Cerqueira GC, Bartholomeu DC. Reis-Cunha JL, et al. Among authors: bartholomeu dc. mBio. 2022 Dec 20;13(6):e0231922. doi: 10.1128/mbio.02319-22. Epub 2022 Oct 20. mBio. 2022. PMID: 36264102 Free PMC article.
130 results