Klychnikov OI - Search Results

1

Covalent attachment and Pro-Pro endopeptidase (PPEP-1)-mediated release of Clostridium difficile cell surface proteins involved in adhesion.

Corver J, Cordo' V, van Leeuwen HC, Klychnikov OI, Hensbergen PJ. Corver J, et al. Among authors: klychnikov oi. Mol Microbiol. 2017 Sep;105(5):663-673. doi: 10.1111/mmi.13736. Epub 2017 Jul 4. Mol Microbiol. 2017. PMID: 28636257 Free article. Review.

2

Ultra-low flow electrospray ionization-mass spectrometry for improved ionization efficiency in phosphoproteomics.

Heemskerk AA, Busnel JM, Schoenmaker B, Derks RJ, Klychnikov O, Hensbergen PJ, Deelder AM, Mayboroda OA. Heemskerk AA, et al. Anal Chem. 2012 May 15;84(10):4552-9. doi: 10.1021/ac300641x. Epub 2012 Apr 26. Anal Chem. 2012. PMID: 22494114

3

A novel secreted metalloprotease (CD2830) from Clostridium difficile cleaves specific proline sequences in LPXTG cell surface proteins.

Hensbergen PJ, Klychnikov OI, Bakker D, van Winden VJ, Ras N, Kemp AC, Cordfunke RA, Dragan I, Deelder AM, Kuijper EJ, Corver J, Drijfhout JW, van Leeuwen HC. Hensbergen PJ, et al. Among authors: klychnikov oi. Mol Cell Proteomics. 2014 May;13(5):1231-44. doi: 10.1074/mcp.M113.034728. Epub 2014 Mar 12. Mol Cell Proteomics. 2014. PMID: 24623589 Free PMC article.

4

Capillary-electrophoresis mass spectrometry for the detection of carbapenemases in (multi-)drug-resistant Gram-negative bacteria.

Fleurbaaij F, Heemskerk AA, Russcher A, Klychnikov OI, Deelder AM, Mayboroda OA, Kuijper EJ, van Leeuwen HC, Hensbergen PJ. Fleurbaaij F, et al. Among authors: klychnikov oi. Anal Chem. 2014 Sep 16;86(18):9154-61. doi: 10.1021/ac502049p. Epub 2014 Sep 4. Anal Chem. 2014. PMID: 25155175

5

Clostridium difficile sortase recognizes a (S/P)PXTG sequence motif and can accommodate diaminopimelic acid as a substrate for transpeptidation.

van Leeuwen HC, Klychnikov OI, Menks MA, Kuijper EJ, Drijfhout JW, Hensbergen PJ. van Leeuwen HC, et al. Among authors: klychnikov oi. FEBS Lett. 2014 Nov 28;588(23):4325-33. doi: 10.1016/j.febslet.2014.09.041. Epub 2014 Oct 23. FEBS Lett. 2014. PMID: 25305382 Free article.

6

Protein and small non-coding RNA-enriched extracellular vesicles are released by the pathogenic blood fluke Schistosoma mansoni.

Nowacki FC, Swain MT, Klychnikov OI, Niazi U, Ivens A, Quintana JF, Hensbergen PJ, Hokke CH, Buck AH, Hoffmann KF. Nowacki FC, et al. Among authors: klychnikov oi. J Extracell Vesicles. 2015 Oct 5;4:28665. doi: 10.3402/jev.v4.28665. eCollection 2015. J Extracell Vesicles. 2015. PMID: 26443722 Free PMC article.

7

Clostridium difficile secreted Pro-Pro endopeptidase PPEP-1 (ZMP1/CD2830) modulates adhesion through cleavage of the collagen binding protein CD2831.

Hensbergen PJ, Klychnikov OI, Bakker D, Dragan I, Kelly ML, Minton NP, Corver J, Kuijper EJ, Drijfhout JW, van Leeuwen HC. Hensbergen PJ, et al. Among authors: klychnikov oi. FEBS Lett. 2015 Dec 21;589(24 Pt B):3952-8. doi: 10.1016/j.febslet.2015.10.027. Epub 2015 Oct 29. FEBS Lett. 2015. PMID: 26522134 Free article.

8

A Novel Fic (Filamentation Induced by cAMP) Protein from Clostridium difficile Reveals an Inhibitory Motif-independent Adenylylation/AMPylation Mechanism.

Dedic E, Alsarraf H, Welner DH, Østergaard O, Klychnikov OI, Hensbergen PJ, Corver J, van Leeuwen HC, Jørgensen R. Dedic E, et al. Among authors: klychnikov oi. J Biol Chem. 2016 Jun 17;291(25):13286-300. doi: 10.1074/jbc.M115.705491. Epub 2016 Apr 13. J Biol Chem. 2016. PMID: 27076635 Free PMC article.

9

Discovery of a new Pro-Pro endopeptidase, PPEP-2, provides mechanistic insights into the differences in substrate specificity within the PPEP family.

Klychnikov OI, Shamorkina TM, Weeks SD, van Leeuwen HC, Corver J, Drijfhout JW, van Veelen PA, Sluchanko NN, Strelkov SV, Hensbergen PJ. Klychnikov OI, et al. J Biol Chem. 2018 Jul 13;293(28):11154-11165. doi: 10.1074/jbc.RA118.003244. Epub 2018 May 23. J Biol Chem. 2018. PMID: 29794027 Free PMC article.

10

In-Depth Specificity Profiling of Endopeptidases Using Dedicated Mix-and-Split Synthetic Peptide Libraries and Mass Spectrometry.

Claushuis B, Cordfunke RA, de Ru AH, Otte A, van Leeuwen HC, Klychnikov OI, van Veelen PA, Corver J, Drijfhout JW, Hensbergen PJ. Claushuis B, et al. Among authors: klychnikov oi. Anal Chem. 2023 Aug 8;95(31):11621-11631. doi: 10.1021/acs.analchem.3c01215. Epub 2023 Jul 26. Anal Chem. 2023. PMID: 37495545 Free PMC article.

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