Fertig EJ - Search Results

1

A Novel Functional Splice Variant of AKT3 Defined by Analysis of Alternative Splice Expression in HPV-Positive Oropharyngeal Cancers.

Guo T, Sakai A, Afsari B, Considine M, Danilova L, Favorov AV, Yegnasubramanian S, Kelley DZ, Flam E, Ha PK, Khan Z, Wheelan SJ, Gutkind JS, Fertig EJ, Gaykalova DA, Califano J. Guo T, et al. Among authors: fertig ej. Cancer Res. 2017 Oct 1;77(19):5248-5258. doi: 10.1158/0008-5472.CAN-16-3106. Epub 2017 Jul 21. Cancer Res. 2017. PMID: 28733453 Free PMC article.

2

CoGAPS: an R/C++ package to identify patterns and biological process activity in transcriptomic data.

Fertig EJ, Ding J, Favorov AV, Parmigiani G, Ochs MF. Fertig EJ, et al. Bioinformatics. 2010 Nov 1;26(21):2792-3. doi: 10.1093/bioinformatics/btq503. Epub 2010 Sep 1. Bioinformatics. 2010. PMID: 20810601 Free PMC article.

3

Hybrid Modeling of Cell Signaling and Transcriptional Reprogramming and Its Application in C. elegans Development.

Fertig EJ, Danilova LV, Favorov AV, Ochs MF. Fertig EJ, et al. Front Genet. 2011 Nov 8;2:77. doi: 10.3389/fgene.2011.00077. eCollection 2011. Front Genet. 2011. PMID: 22303372 Free PMC article.

4

Gene expression signatures modulated by epidermal growth factor receptor activation and their relationship to cetuximab resistance in head and neck squamous cell carcinoma.

Fertig EJ, Ren Q, Cheng H, Hatakeyama H, Dicker AP, Rodeck U, Considine M, Ochs MF, Chung CH. Fertig EJ, et al. BMC Genomics. 2012 May 1;13:160. doi: 10.1186/1471-2164-13-160. BMC Genomics. 2012. PMID: 22549044 Free PMC article.

5

Inhibition of TGF-β enhances the in vivo antitumor efficacy of EGF receptor-targeted therapy.

Bedi A, Chang X, Noonan K, Pham V, Bedi R, Fertig EJ, Considine M, Califano JA, Borrello I, Chung CH, Sidransky D, Ravi R. Bedi A, et al. Among authors: fertig ej. Mol Cancer Ther. 2012 Nov;11(11):2429-39. doi: 10.1158/1535-7163.MCT-12-0101-T. Epub 2012 Aug 27. Mol Cancer Ther. 2012. PMID: 22927667 Free PMC article.

6

Identifying context-specific transcription factor targets from prior knowledge and gene expression data.

Fertig EJ, Favorov AV, Ochs MF. Fertig EJ, et al. IEEE Trans Nanobioscience. 2013 Sep;12(3):142-9. doi: 10.1109/TNB.2013.2263390. Epub 2013 May 16. IEEE Trans Nanobioscience. 2013. PMID: 23694699 Free PMC article.

7

The twist box domain is required for Twist1-induced prostate cancer metastasis.

Gajula RP, Chettiar ST, Williams RD, Thiyagarajan S, Kato Y, Aziz K, Wang R, Gandhi N, Wild AT, Vesuna F, Ma J, Salih T, Cades J, Fertig E, Biswal S, Burns TF, Chung CH, Rudin CM, Herman JM, Hales RK, Raman V, An SS, Tran PT. Gajula RP, et al. Mol Cancer Res. 2013 Nov;11(11):1387-400. doi: 10.1158/1541-7786.MCR-13-0218-T. Epub 2013 Aug 27. Mol Cancer Res. 2013. PMID: 23982216 Free PMC article.

8

Preferential activation of the hedgehog pathway by epigenetic modulations in HPV negative HNSCC identified with meta-pathway analysis.

Fertig EJ, Markovic A, Danilova LV, Gaykalova DA, Cope L, Chung CH, Ochs MF, Califano JA. Fertig EJ, et al. PLoS One. 2013 Nov 4;8(11):e78127. doi: 10.1371/journal.pone.0078127. eCollection 2013. PLoS One. 2013. PMID: 24223768 Free PMC article.

9

Activation of the NOTCH pathway in head and neck cancer.

Sun W, Gaykalova DA, Ochs MF, Mambo E, Arnaoutakis D, Liu Y, Loyo M, Agrawal N, Howard J, Li R, Ahn S, Fertig E, Sidransky D, Houghton J, Buddavarapu K, Sanford T, Choudhary A, Darden W, Adai A, Latham G, Bishop J, Sharma R, Westra WH, Hennessey P, Chung CH, Califano JA. Sun W, et al. Cancer Res. 2014 Feb 15;74(4):1091-104. doi: 10.1158/0008-5472.CAN-13-1259. Epub 2013 Dec 18. Cancer Res. 2014. PMID: 24351288 Free PMC article.

10

Expression microarray analysis reveals alternative splicing of LAMA3 and DST genes in head and neck squamous cell carcinoma.

Li R, Ochs MF, Ahn SM, Hennessey P, Tan M, Soudry E, Gaykalova DA, Uemura M, Brait M, Shao C, Westra W, Bishop J, Fertig EJ, Califano JA. Li R, et al. Among authors: fertig ej. PLoS One. 2014 Mar 27;9(3):e91263. doi: 10.1371/journal.pone.0091263. eCollection 2014. PLoS One. 2014. PMID: 24675808 Free PMC article.

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