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Towards a more molecular taxonomy of disease.
Park J, Hescott BJ, Slonim DK. Park J, et al. Among authors: slonim dk. J Biomed Semantics. 2017 Jul 27;8(1):25. doi: 10.1186/s13326-017-0134-0. J Biomed Semantics. 2017. PMID: 28750648 Free PMC article.
Evaluating between-pathway models with expression data.
Hescott BJ, Leiserson MD, Cowen LJ, Slonim DK. Hescott BJ, et al. Among authors: slonim dk. J Comput Biol. 2010 Mar;17(3):477-87. doi: 10.1089/cmb.2009.0178. J Comput Biol. 2010. PMID: 20377458 Free PMC article.
Assessment of network module identification across complex diseases.
Choobdar S, Ahsen ME, Crawford J, Tomasoni M, Fang T, Lamparter D, Lin J, Hescott B, Hu X, Mercer J, Natoli T, Narayan R; DREAM Module Identification Challenge Consortium; Subramanian A, Zhang JD, Stolovitzky G, Kutalik Z, Lage K, Slonim DK, Saez-Rodriguez J, Cowen LJ, Bergmann S, Marbach D. Choobdar S, et al. Among authors: slonim dk. Nat Methods. 2019 Sep;16(9):843-852. doi: 10.1038/s41592-019-0509-5. Epub 2019 Aug 30. Nat Methods. 2019. PMID: 31471613 Free PMC article.
Chemosensitivity prediction by transcriptional profiling.
Staunton JE, Slonim DK, Coller HA, Tamayo P, Angelo MJ, Park J, Scherf U, Lee JK, Reinhold WO, Weinstein JN, Mesirov JP, Lander ES, Golub TR. Staunton JE, et al. Among authors: slonim dk. Proc Natl Acad Sci U S A. 2001 Sep 11;98(19):10787-92. doi: 10.1073/pnas.191368598. Proc Natl Acad Sci U S A. 2001. PMID: 11553813 Free PMC article.
The Gene Ontology: enhancements for 2011.
Gene Ontology Consortium. Gene Ontology Consortium. Nucleic Acids Res. 2012 Jan;40(Database issue):D559-64. doi: 10.1093/nar/gkr1028. Epub 2011 Nov 18. Nucleic Acids Res. 2012. PMID: 22102568 Free PMC article.
DFLAT: functional annotation for human development.
Wick HC, Drabkin H, Ngu H, Sackman M, Fournier C, Haggett J, Blake JA, Bianchi DW, Slonim DK. Wick HC, et al. Among authors: slonim dk. BMC Bioinformatics. 2014 Feb 7;15:45. doi: 10.1186/1471-2105-15-45. BMC Bioinformatics. 2014. PMID: 24507166 Free PMC article.
64 results