Ingle DJ - Search Results

1

Corrigendum: In silico serotyping of E. coli from short read data identifies limited novel O-loci but extensive diversity of O:H serotype combinations within and between pathogenic lineages.

Ingle DJ, Valcanis M, Kuzevski A, Tauschek M, Inouye M, Stinear T, Levine MM, Robins-Browne RM, Holt KE. Ingle DJ, et al. Microb Genom. 2017 Aug 1;3(7):e000109. doi: 10.1099/mgen.0.000109. eCollection 2017 Jul. Microb Genom. 2017. PMID: 29026653 Free PMC article.

2

Evolution of atypical enteropathogenic E. coli by repeated acquisition of LEE pathogenicity island variants.

Ingle DJ, Tauschek M, Edwards DJ, Hocking DM, Pickard DJ, Azzopardi KI, Amarasena T, Bennett-Wood V, Pearson JS, Tamboura B, Antonio M, Ochieng JB, Oundo J, Mandomando I, Qureshi S, Ramamurthy T, Hossain A, Kotloff KL, Nataro JP, Dougan G, Levine MM, Robins-Browne RM, Holt KE. Ingle DJ, et al. Nat Microbiol. 2016 Jan 18;1:15010. doi: 10.1038/nmicrobiol.2015.10. Nat Microbiol. 2016. PMID: 27571974

3

Are Escherichia coli Pathotypes Still Relevant in the Era of Whole-Genome Sequencing?

Robins-Browne RM, Holt KE, Ingle DJ, Hocking DM, Yang J, Tauschek M. Robins-Browne RM, et al. Among authors: ingle dj. Front Cell Infect Microbiol. 2016 Nov 18;6:141. doi: 10.3389/fcimb.2016.00141. eCollection 2016. Front Cell Infect Microbiol. 2016. PMID: 27917373 Free PMC article. Review.

4

Repeated local emergence of carbapenem-resistant Acinetobacter baumannii in a single hospital ward.

Schultz MB, Pham Thanh D, Tran Do Hoan N, Wick RR, Ingle DJ, Hawkey J, Edwards DJ, Kenyon JJ, Phu Huong Lan N, Campbell JI, Thwaites G, Thi Khanh Nhu N, Hall RM, Fournier-Level A, Baker S, Holt KE. Schultz MB, et al. Among authors: ingle dj. Microb Genom. 2016 Mar 2;2(3):e000050. doi: 10.1099/mgen.0.000050. eCollection 2016 Mar. Microb Genom. 2016. PMID: 28348846 Free PMC article.

5

In silico serotyping of E. coli from short read data identifies limited novel O-loci but extensive diversity of O:H serotype combinations within and between pathogenic lineages.

Ingle DJ, Valcanis M, Kuzevski A, Tauschek M, Inouye M, Stinear T, Levine MM, Robins-Browne RM, Holt KE. Ingle DJ, et al. Microb Genom. 2016 Jul 11;2(7):e000064. doi: 10.1099/mgen.0.000064. eCollection 2016 Jul. Microb Genom. 2016. PMID: 28348859 Free PMC article.

6

Dynamics of antimicrobial resistance in intestinal Escherichia coli from children in community settings in South Asia and sub-Saharan Africa.

Ingle DJ, Levine MM, Kotloff KL, Holt KE, Robins-Browne RM. Ingle DJ, et al. Nat Microbiol. 2018 Sep;3(9):1063-1073. doi: 10.1038/s41564-018-0217-4. Epub 2018 Aug 20. Nat Microbiol. 2018. PMID: 30127495 Free PMC article.

7

Co-circulation of Multidrug-resistant Shigella Among Men Who Have Sex With Men in Australia.

Ingle DJ, Easton M, Valcanis M, Seemann T, Kwong JC, Stephens N, Carter GP, Gonçalves da Silva A, Adamopoulos J, Baines SL, Holt KE, Chow EPF, Fairley CK, Chen MY, Kirk MD, Howden BP, Williamson DA. Ingle DJ, et al. Clin Infect Dis. 2019 Oct 15;69(9):1535-1544. doi: 10.1093/cid/ciz005. Clin Infect Dis. 2019. PMID: 30615105

8

Emergence and divergence of major lineages of Shiga-toxin-producing Escherichia coli in Australia.

Ingle DJ, Gonçalves da Silva A, Valcanis M, Ballard SA, Seemann T, Jennison AV, Bastian I, Wise R, Kirk MD, Howden BP, Williamson DA. Ingle DJ, et al. Microb Genom. 2019 May;5(5):e000268. doi: 10.1099/mgen.0.000268. Epub 2019 May 20. Microb Genom. 2019. PMID: 31107203 Free PMC article.

9

Informal genomic surveillance of regional distribution of Salmonella Typhi genotypes and antimicrobial resistance via returning travellers.

Ingle DJ, Nair S, Hartman H, Ashton PM, Dyson ZA, Day M, Freedman J, Chattaway MA, Holt KE, Dallman TJ. Ingle DJ, et al. PLoS Negl Trop Dis. 2019 Sep 12;13(9):e0007620. doi: 10.1371/journal.pntd.0007620. eCollection 2019 Sep. PLoS Negl Trop Dis. 2019. PMID: 31513580 Free PMC article.

10

GeneMates: an R package for detecting horizontal gene co-transfer between bacteria using gene-gene associations controlled for population structure.

Wan Y, Wick RR, Zobel J, Ingle DJ, Inouye M, Holt KE. Wan Y, et al. Among authors: ingle dj. BMC Genomics. 2020 Sep 24;21(1):658. doi: 10.1186/s12864-020-07019-6. BMC Genomics. 2020. PMID: 32972363 Free PMC article.

Save citations to file

Email citations

Send citations to clipboard

Add to Collections

Add to My Bibliography

Create a file for external citation management software

Your saved search

Your RSS Feed

My NCBI Filters

Text availability

Article attribute

Article type

Publication date

248 results

Search Page