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Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill.
Mason OU, Hazen TC, Borglin S, Chain PS, Dubinsky EA, Fortney JL, Han J, Holman HY, Hultman J, Lamendella R, Mackelprang R, Malfatti S, Tom LM, Tringe SG, Woyke T, Zhou J, Rubin EM, Jansson JK. Mason OU, et al. Among authors: tringe sg. ISME J. 2012 Sep;6(9):1715-27. doi: 10.1038/ismej.2012.59. Epub 2012 Jun 21. ISME J. 2012. PMID: 22717885 Free PMC article.
Comparative metagenomics reveals impact of contaminants on groundwater microbiomes.
Hemme CL, Tu Q, Shi Z, Qin Y, Gao W, Deng Y, Nostrand JD, Wu L, He Z, Chain PS, Tringe SG, Fields MW, Rubin EM, Tiedje JM, Hazen TC, Arkin AP, Zhou J. Hemme CL, et al. Among authors: tringe sg. Front Microbiol. 2015 Oct 31;6:1205. doi: 10.3389/fmicb.2015.01205. eCollection 2015. Front Microbiol. 2015. PMID: 26583008 Free PMC article.
Diurnal cycling of rhizosphere bacterial communities is associated with shifts in carbon metabolism.
Staley C, Ferrieri AP, Tfaily MM, Cui Y, Chu RK, Wang P, Shaw JB, Ansong CK, Brewer H, Norbeck AD, Markillie M, do Amaral F, Tuleski T, Pellizzaro T, Agtuca B, Ferrieri R, Tringe SG, Paša-Tolić L, Stacey G, Sadowsky MJ. Staley C, et al. Among authors: tringe sg. Microbiome. 2017 Jun 24;5(1):65. doi: 10.1186/s40168-017-0287-1. Microbiome. 2017. PMID: 28646918 Free PMC article.
A compendium of multi-omic sequence information from the Saanich Inlet water column.
Hawley AK, Torres-Beltrán M, Zaikova E, Walsh DA, Mueller A, Scofield M, Kheirandish S, Payne C, Pakhomova L, Bhatia M, Shevchuk O, Gies EA, Fairley D, Malfatti SA, Norbeck AD, Brewer HM, Pasa-Tolic L, Del Rio TG, Suttle CA, Tringe S, Hallam SJ. Hawley AK, et al. Sci Data. 2017 Oct 31;4:170160. doi: 10.1038/sdata.2017.160. Sci Data. 2017. PMID: 29087368 Free PMC article.
Proteome specialization of anaerobic fungi during ruminal degradation of recalcitrant plant fiber.
Hagen LH, Brooke CG, Shaw CA, Norbeck AD, Piao H, Arntzen MØ, Olson HM, Copeland A, Isern N, Shukla A, Roux S, Lombard V, Henrissat B, O'Malley MA, Grigoriev IV, Tringe SG, Mackie RI, Pasa-Tolic L, Pope PB, Hess M. Hagen LH, et al. Among authors: tringe sg. ISME J. 2021 Feb;15(2):421-434. doi: 10.1038/s41396-020-00769-x. Epub 2020 Sep 14. ISME J. 2021. PMID: 32929206 Free PMC article.
180 results