Rueda D - Search Results

1

Fluorogenic RNA Mango aptamers for imaging small non-coding RNAs in mammalian cells.

Autour A, C Y Jeng S, D Cawte A, Abdolahzadeh A, Galli A, Panchapakesan SSS, Rueda D, Ryckelynck M, Unrau PJ. Autour A, et al. Among authors: rueda d, d cawte a. Nat Commun. 2018 Feb 13;9(1):656. doi: 10.1038/s41467-018-02993-8. Nat Commun. 2018. PMID: 29440634 Free PMC article.

2

Activation-induced deoxycytidine deaminase (AID) co-transcriptional scanning at single-molecule resolution.

Senavirathne G, Bertram JG, Jaszczur M, Chaurasiya KR, Pham P, Mak CH, Goodman MF, Rueda D. Senavirathne G, et al. Among authors: rueda d. Nat Commun. 2015 Dec 18;6:10209. doi: 10.1038/ncomms10209. Nat Commun. 2015. PMID: 26681117 Free PMC article.

3

Cryo-EM structures of the eukaryotic replicative helicase bound to a translocation substrate.

Abid Ali F, Renault L, Gannon J, Gahlon HL, Kotecha A, Zhou JC, Rueda D, Costa A. Abid Ali F, et al. Among authors: rueda d. Nat Commun. 2016 Feb 18;7:10708. doi: 10.1038/ncomms10708. Nat Commun. 2016. PMID: 26888060 Free PMC article.

4

Mapping the sugar dependency for rational generation of a DNA-RNA hybrid-guided Cas9 endonuclease.

Rueda FO, Bista M, Newton MD, Goeppert AU, Cuomo ME, Gordon E, Kröner F, Read JA, Wrigley JD, Rueda D, Taylor BJM. Rueda FO, et al. Among authors: rueda d. Nat Commun. 2017 Nov 20;8(1):1610. doi: 10.1038/s41467-017-01732-9. Nat Commun. 2017. PMID: 29151576 Free PMC article.

5

Retroviral integration into nucleosomes through DNA looping and sliding along the histone octamer.

Wilson MD, Renault L, Maskell DP, Ghoneim M, Pye VE, Nans A, Rueda DS, Cherepanov P, Costa A. Wilson MD, et al. Among authors: rueda ds. Nat Commun. 2019 Sep 13;10(1):4189. doi: 10.1038/s41467-019-12007-w. Nat Commun. 2019. PMID: 31519882 Free PMC article.

6

Live cell imaging of single RNA molecules with fluorogenic Mango II arrays.

Cawte AD, Unrau PJ, Rueda DS. Cawte AD, et al. Among authors: rueda ds. Nat Commun. 2020 Mar 9;11(1):1283. doi: 10.1038/s41467-020-14932-7. Nat Commun. 2020. PMID: 32152311 Free PMC article.

7

Single-Molecule RNA Imaging Using Mango II Arrays.

Cawte AD, Iino H, Unrau PJ, Rueda DS. Cawte AD, et al. Among authors: rueda ds. Methods Mol Biol. 2022;2404:267-280. doi: 10.1007/978-1-0716-1851-6_14. Methods Mol Biol. 2022. PMID: 34694614

8

Search and processing of Holliday junctions within long DNA by junction-resolving enzymes.

Kaczmarczyk AP, Déclais AC, Newton MD, Boulton SJ, Lilley DMJ, Rueda DS. Kaczmarczyk AP, et al. Among authors: rueda ds. Nat Commun. 2022 Oct 7;13(1):5921. doi: 10.1038/s41467-022-33503-6. Nat Commun. 2022. PMID: 36207294 Free PMC article.

9

Single-molecule fluorescence-based studies on the dynamics, assembly and catalytic mechanism of the spliceosome.

Warnasooriya C, Rueda D. Warnasooriya C, et al. Among authors: rueda d. Biochem Soc Trans. 2014 Aug;42(4):1211-8. doi: 10.1042/BST20140105. Biochem Soc Trans. 2014. PMID: 25110027 Review.

10

Active and poised promoter states drive folding of the extended HoxB locus in mouse embryonic stem cells.

Barbieri M, Xie SQ, Torlai Triglia E, Chiariello AM, Bianco S, de Santiago I, Branco MR, Rueda D, Nicodemi M, Pombo A. Barbieri M, et al. Among authors: rueda d. Nat Struct Mol Biol. 2017 Jun;24(6):515-524. doi: 10.1038/nsmb.3402. Epub 2017 Apr 24. Nat Struct Mol Biol. 2017. PMID: 28436944 Free article.

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