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Metabolite damage and repair in metabolic engineering design.
Sun J, Jeffryes JG, Henry CS, Bruner SD, Hanson AD. Sun J, et al. Among authors: jeffryes jg. Metab Eng. 2017 Nov;44:150-159. doi: 10.1016/j.ymben.2017.10.006. Epub 2017 Oct 10. Metab Eng. 2017. PMID: 29030275 Review.
The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes.
Seaver SMD, Liu F, Zhang Q, Jeffryes J, Faria JP, Edirisinghe JN, Mundy M, Chia N, Noor E, Beber ME, Best AA, DeJongh M, Kimbrel JA, D'haeseleer P, McCorkle SR, Bolton JR, Pearson E, Canon S, Wood-Charlson EM, Cottingham RW, Arkin AP, Henry CS. Seaver SMD, et al. Nucleic Acids Res. 2021 Jan 8;49(D1):D575-D588. doi: 10.1093/nar/gkaa746. Nucleic Acids Res. 2021. PMID: 32986834 Free PMC article.
The ModelSEED Biochemistry Database for the integration of metabolic annotations and the reconstruction, comparison and analysis of metabolic models for plants, fungi and microbes.
Seaver SMD, Liu F, Zhang Q, Jeffryes J, Faria JP, Edirisinghe JN, Mundy M, Chia N, Noor E, Beber ME, Best AA, DeJongh M, Kimbrel JA, D'haeseleer P, McCorkle SR, Bolton JR, Pearson E, Canon S, Wood-Charlson EM, Cottingham RW, Arkin AP, Henry CS. Seaver SMD, et al. Nucleic Acids Res. 2021 Jan 8;49(D1):D1555. doi: 10.1093/nar/gkaa1143. Nucleic Acids Res. 2021. PMID: 33179751 Free PMC article. No abstract available.
A directed-overflow and damage-control N-glycosidase in riboflavin biosynthesis.
Frelin O, Huang L, Hasnain G, Jeffryes JG, Ziemak MJ, Rocca JR, Wang B, Rice J, Roje S, Yurgel SN, Gregory JF 3rd, Edison AS, Henry CS, de Crécy-Lagard V, Hanson AD. Frelin O, et al. Among authors: jeffryes jg. Biochem J. 2015 Feb 15;466(1):137-45. doi: 10.1042/BJ20141237. Biochem J. 2015. PMID: 25431972 Free PMC article.