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Integration of novel SSR and gene-based SNP marker loci in the chickpea genetic map and establishment of new anchor points with Medicago truncatula genome.
Nayak SN, Zhu H, Varghese N, Datta S, Choi HK, Horres R, Jüngling R, Singh J, Kishor PB, Sivaramakrishnan S, Hoisington DA, Kahl G, Winter P, Cook DR, Varshney RK. Nayak SN, et al. Among authors: varshney rk. Theor Appl Genet. 2010 May;120(7):1415-41. doi: 10.1007/s00122-010-1265-1. Epub 2010 Jan 23. Theor Appl Genet. 2010. PMID: 20098978 Free PMC article.
Defining the transcriptome assembly and its use for genome dynamics and transcriptome profiling studies in pigeonpea (Cajanus cajan L.).
Dubey A, Farmer A, Schlueter J, Cannon SB, Abernathy B, Tuteja R, Woodward J, Shah T, Mulasmanovic B, Kudapa H, Raju NL, Gothalwal R, Pande S, Xiao Y, Town CD, Singh NK, May GD, Jackson S, Varshney RK. Dubey A, et al. Among authors: varshney rk. DNA Res. 2011 Jun;18(3):153-64. doi: 10.1093/dnares/dsr007. Epub 2011 May 12. DNA Res. 2011. PMID: 21565938 Free PMC article.
Novel SSR markers from BAC-end sequences, DArT arrays and a comprehensive genetic map with 1,291 marker loci for chickpea (Cicer arietinum L.).
Thudi M, Bohra A, Nayak SN, Varghese N, Shah TM, Penmetsa RV, Thirunavukkarasu N, Gudipati S, Gaur PM, Kulwal PL, Upadhyaya HD, Kavikishor PB, Winter P, Kahl G, Town CD, Kilian A, Cook DR, Varshney RK. Thudi M, et al. Among authors: varshney rk. PLoS One. 2011;6(11):e27275. doi: 10.1371/journal.pone.0027275. Epub 2011 Nov 15. PLoS One. 2011. PMID: 22102885 Free PMC article.
Large-scale development of cost-effective SNP marker assays for diversity assessment and genetic mapping in chickpea and comparative mapping in legumes.
Hiremath PJ, Kumar A, Penmetsa RV, Farmer A, Schlueter JA, Chamarthi SK, Whaley AM, Carrasquilla-Garcia N, Gaur PM, Upadhyaya HD, Kavi Kishor PB, Shah TM, Cook DR, Varshney RK. Hiremath PJ, et al. Among authors: varshney rk. Plant Biotechnol J. 2012 Aug;10(6):716-32. doi: 10.1111/j.1467-7652.2012.00710.x. Epub 2012 Jun 16. Plant Biotechnol J. 2012. PMID: 22703242 Free PMC article.
An international reference consensus genetic map with 897 marker loci based on 11 mapping populations for tetraploid groundnut (Arachis hypogaea L.).
Gautami B, Foncéka D, Pandey MK, Moretzsohn MC, Sujay V, Qin H, Hong Y, Faye I, Chen X, BhanuPrakash A, Shah TM, Gowda MV, Nigam SN, Liang X, Hoisington DA, Guo B, Bertioli DJ, Rami JF, Varshney RK. Gautami B, et al. Among authors: varshney rk. PLoS One. 2012;7(7):e41213. doi: 10.1371/journal.pone.0041213. Epub 2012 Jul 18. PLoS One. 2012. PMID: 22815973 Free PMC article.
Large-scale development of cost-effective single-nucleotide polymorphism marker assays for genetic mapping in pigeonpea and comparative mapping in legumes.
Saxena RK, Penmetsa RV, Upadhyaya HD, Kumar A, Carrasquilla-Garcia N, Schlueter JA, Farmer A, Whaley AM, Sarma BK, May GD, Cook DR, Varshney RK. Saxena RK, et al. Among authors: varshney rk. DNA Res. 2012 Dec;19(6):449-61. doi: 10.1093/dnares/dss025. Epub 2012 Oct 26. DNA Res. 2012. PMID: 23103470 Free PMC article.
580 results