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Development and evaluation of a genome-wide Coffee 8.5K SNP array and its application for high-density genetic mapping and for investigating the origin of Coffea arabica L.
Merot-L'anthoene V, Tournebize R, Darracq O, Rattina V, Lepelley M, Bellanger L, Tranchant-Dubreuil C, Coulée M, Pégard M, Metairon S, Fournier C, Stoffelen P, Janssens SB, Kiwuka C, Musoli P, Sumirat U, Legnaté H, Kambale JL, Ferreira da Costa Neto J, Revel C, de Kochko A, Descombes P, Crouzillat D, Poncet V. Merot-L'anthoene V, et al. Among authors: musoli p. Plant Biotechnol J. 2019 Jul;17(7):1418-1430. doi: 10.1111/pbi.13066. Epub 2019 Feb 4. Plant Biotechnol J. 2019. PMID: 30582651 Free PMC article.
Genetic diversity of native and cultivated Ugandan Robusta coffee (Coffea canephora Pierre ex A. Froehner): Climate influences, breeding potential and diversity conservation.
Kiwuka C, Goudsmit E, Tournebize R, de Aquino SO, Douma JC, Bellanger L, Crouzillat D, Stoffelen P, Sumirat U, Legnaté H, Marraccini P, de Kochko A, Andrade AC, Mulumba JW, Musoli P, Anten NPR, Poncet V. Kiwuka C, et al. Among authors: musoli p. PLoS One. 2021 Feb 8;16(2):e0245965. doi: 10.1371/journal.pone.0245965. eCollection 2021. PLoS One. 2021. PMID: 33556074 Free PMC article.
Adaptive potential of Coffea canephora from Uganda in response to climate change.
de Aquino SO, Kiwuka C, Tournebize R, Gain C, Marraccini P, Mariac C, Bethune K, Couderc M, Cubry P, Andrade AC, Lepelley M, Darracq O, Crouzillat D, Anten N, Musoli P, Vigouroux Y, de Kochko A, Manel S, François O, Poncet V. de Aquino SO, et al. Among authors: musoli p. Mol Ecol. 2022 Mar;31(6):1800-1819. doi: 10.1111/mec.16360. Epub 2022 Feb 1. Mol Ecol. 2022. PMID: 35060228
Ecological and genomic vulnerability to climate change across native populations of Robusta coffee (Coffea canephora).
Tournebize R, Borner L, Manel S, Meynard CN, Vigouroux Y, Crouzillat D, Fournier C, Kassam M, Descombes P, Tranchant-Dubreuil C, Parrinello H, Kiwuka C, Sumirat U, Legnate H, Kambale JL, Sonké B, Mahinga JC, Musoli P, Janssens SB, Stoffelen P, de Kochko A, Poncet V. Tournebize R, et al. Among authors: musoli p. Glob Chang Biol. 2022 Jul;28(13):4124-4142. doi: 10.1111/gcb.16191. Epub 2022 May 8. Glob Chang Biol. 2022. PMID: 35527235
The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars.
Salojärvi J, Rambani A, Yu Z, Guyot R, Strickler S, Lepelley M, Wang C, Rajaraman S, Rastas P, Zheng C, Muñoz DS, Meidanis J, Paschoal AR, Bawin Y, Krabbenhoft TJ, Wang ZQ, Fleck SJ, Aussel R, Bellanger L, Charpagne A, Fournier C, Kassam M, Lefebvre G, Métairon S, Moine D, Rigoreau M, Stolte J, Hamon P, Couturon E, Tranchant-Dubreuil C, Mukherjee M, Lan T, Engelhardt J, Stadler P, Correia De Lemos SM, Suzuki SI, Sumirat U, Wai CM, Dauchot N, Orozco-Arias S, Garavito A, Kiwuka C, Musoli P, Nalukenge A, Guichoux E, Reinout H, Smit M, Carretero-Paulet L, Filho OG, Braghini MT, Padilha L, Sera GH, Ruttink T, Henry R, Marraccini P, Van de Peer Y, Andrade A, Domingues D, Giuliano G, Mueller L, Pereira LF, Plaisance S, Poncet V, Rombauts S, Sankoff D, Albert VA, Crouzillat D, de Kochko A, Descombes P. Salojärvi J, et al. Among authors: musoli p. Nat Genet. 2024 Apr;56(4):721-731. doi: 10.1038/s41588-024-01695-w. Epub 2024 Apr 15. Nat Genet. 2024. PMID: 38622339 Free PMC article.