Bagchi S - Search Results

1

Scalable Genome Assembly through Parallel de Bruijn Graph Construction for Multiple k-mers.

Mahadik K, Wright C, Kulkarni M, Bagchi S, Chaterji S. Mahadik K, et al. Among authors: bagchi s. Sci Rep. 2019 Oct 16;9(1):14882. doi: 10.1038/s41598-019-51284-9. Sci Rep. 2019. PMID: 31619717 Free PMC article.

2

MicroRNA target prediction using thermodynamic and sequence curves.

Ghoshal A, Shankar R, Bagchi S, Grama A, Chaterji S. Ghoshal A, et al. Among authors: bagchi s. BMC Genomics. 2015 Nov 25;16:999. doi: 10.1186/s12864-015-1933-2. BMC Genomics. 2015. PMID: 26608597 Free PMC article.

3

The MG-RAST metagenomics database and portal in 2015.

Wilke A, Bischof J, Gerlach W, Glass E, Harrison T, Keegan KP, Paczian T, Trimble WL, Bagchi S, Grama A, Chaterji S, Meyer F. Wilke A, et al. Among authors: bagchi s. Nucleic Acids Res. 2016 Jan 4;44(D1):D590-4. doi: 10.1093/nar/gkv1322. Epub 2015 Dec 9. Nucleic Acids Res. 2016. PMID: 26656948 Free PMC article.

4

Erratum to: 'MicroRNA target prediction using thermodynamic and sequence curves'.

Ghoshal A, Shankar R, Bagchi S, Grama A, Chaterji S. Ghoshal A, et al. Among authors: bagchi s. BMC Genomics. 2016 Mar 9;17:216. doi: 10.1186/s12864-016-2367-1. BMC Genomics. 2016. PMID: 26960331 Free PMC article. No abstract available.

5

Federation in genomics pipelines: techniques and challenges.

Chaterji S, Koo J, Li N, Meyer F, Grama A, Bagchi S. Chaterji S, et al. Among authors: bagchi s. Brief Bioinform. 2019 Jan 18;20(1):235-244. doi: 10.1093/bib/bbx102. Brief Bioinform. 2019. PMID: 28968781 Free PMC article.

6

MG-RAST version 4-lessons learned from a decade of low-budget ultra-high-throughput metagenome analysis.

Meyer F, Bagchi S, Chaterji S, Gerlach W, Grama A, Harrison T, Paczian T, Trimble WL, Wilke A. Meyer F, et al. Among authors: bagchi s. Brief Bioinform. 2019 Jul 19;20(4):1151-1159. doi: 10.1093/bib/bbx105. Brief Bioinform. 2019. PMID: 29028869 Free PMC article.

7

Temperature Self-Calibration of Always-On, Field-Deployed Ion-Selective Electrodes Based on Differential Voltage Measurement.

Saha A, Yermembetova A, Mi Y, Gopalakrishnan S, Sedaghat S, Waimin J, Wang P, Glassmaker N, Mousoulis C, Raghunathan N, Bagchi S, Rahimi R, Shakouri A, Wei A, Alam MA. Saha A, et al. Among authors: bagchi s. ACS Sens. 2022 Sep 23;7(9):2661-2670. doi: 10.1021/acssensors.2c01163. Epub 2022 Sep 8. ACS Sens. 2022. PMID: 36074898

8

Anomaly Detection and Inter-Sensor Transfer Learning on Smart Manufacturing Datasets.

Abdallah M, Joung BG, Lee WJ, Mousoulis C, Raghunathan N, Shakouri A, Sutherland JW, Bagchi S. Abdallah M, et al. Among authors: bagchi s. Sensors (Basel). 2023 Jan 2;23(1):486. doi: 10.3390/s23010486. Sensors (Basel). 2023. PMID: 36617091 Free PMC article.

9

Evaluation of Systemic and Brain Pharmacokinetic Parameters for Repurposing Metformin Using Intravenous Bolus Administration.

Sharma S, Zhang Y, Patel D, Akter KA, Bagchi S, Sifat AE, Nozohouri E, Ahn Y, Karamyan VT, Bickel U, Abbruscato TJ. Sharma S, et al. Among authors: bagchi s. J Pharmacol Exp Ther. 2024 May 22:JPET-AR-2024-002152. doi: 10.1124/jpet.124.002152. Online ahead of print. J Pharmacol Exp Ther. 2024. PMID: 38777603 Free article.

10

Gender and kidney transplantation.

Nautiyal A, Bagchi S, Bansal SB. Nautiyal A, et al. Among authors: bagchi s. Front Nephrol. 2024 Apr 22;4:1360856. doi: 10.3389/fneph.2024.1360856. eCollection 2024. Front Nephrol. 2024. PMID: 38711923 Free PMC article. Review.

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