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Latent Dirichlet Allocation reveals spatial and taxonomic structure in a DNA-based census of soil biodiversity from a tropical forest.
Mol Ecol Resour. 2020 Mar;20(2):371-386. doi: 10.1111/1755-0998.13109. Epub 2019 Dec 2.
Mol Ecol Resour. 2020.
PMID: 31650682
Inferring neutral biodiversity parameters using environmental DNA data sets.
Sommeria-Klein G, Zinger L, Taberlet P, Coissac E, Chave J.
Sommeria-Klein G, et al.
Sci Rep. 2016 Oct 20;6:35644. doi: 10.1038/srep35644.
Sci Rep. 2016.
PMID: 27762295
Free PMC article.
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Global drivers of eukaryotic plankton biogeography in the sunlit ocean.
Sommeria-Klein G, Watteaux R, Ibarbalz FM, Pierella Karlusich JJ, Iudicone D, Bowler C, Morlon H.
Sommeria-Klein G, et al.
Science. 2021 Oct 29;374(6567):594-599. doi: 10.1126/science.abb3717. Epub 2021 Oct 28.
Science. 2021.
PMID: 34709919
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Phylogenetic Comparative Approach Reveals Evolutionary Conservatism, Ancestral Composition, and Integration of Vertebrate Gut Microbiota.
Perez-Lamarque B, Sommeria-Klein G, Duret L, Morlon H.
Perez-Lamarque B, et al. Among authors: sommeria klein g.
Mol Biol Evol. 2023 Jul 5;40(7):msad144. doi: 10.1093/molbev/msad144.
Mol Biol Evol. 2023.
PMID: 37326290
Free PMC article.
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Priorities for ocean microbiome research.
Tara Ocean Foundation; Tara Oceans; European Molecular Biology Laboratory (EMBL); European Marine Biological Resource Centre - European Research Infrastructure Consortium (EMBRC-ERIC).
Tara Ocean Foundation, et al.
Nat Microbiol. 2022 Jul;7(7):937-947. doi: 10.1038/s41564-022-01145-5. Epub 2022 Jun 30.
Nat Microbiol. 2022.
PMID: 35773399
Review.
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Modelling spatial patterns in host-associated microbial communities.
Ruuskanen MO, Sommeria-Klein G, Havulinna AS, Niiranen TJ, Lahti L.
Ruuskanen MO, et al. Among authors: sommeria klein g.
Environ Microbiol. 2021 May;23(5):2374-2388. doi: 10.1111/1462-2920.15462. Epub 2021 Mar 24.
Environ Microbiol. 2021.
PMID: 33734553
Review.
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Quantifying the impact of ecological memory on the dynamics of interacting communities.
Khalighi M, Sommeria-Klein G, Gonze D, Faust K, Lahti L.
Khalighi M, et al. Among authors: sommeria klein g.
PLoS Comput Biol. 2022 Jun 3;18(6):e1009396. doi: 10.1371/journal.pcbi.1009396. eCollection 2022 Jun.
PLoS Comput Biol. 2022.
PMID: 35658019
Free PMC article.
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