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Comparative analysis of amplicon and metagenomic sequencing methods reveals key features in the evolution of animal metaorganisms.
Rausch P, Rühlemann M, Hermes BM, Doms S, Dagan T, Dierking K, Domin H, Fraune S, von Frieling J, Hentschel U, Heinsen FA, Höppner M, Jahn MT, Jaspers C, Kissoyan KAB, Langfeldt D, Rehman A, Reusch TBH, Roeder T, Schmitz RA, Schulenburg H, Soluch R, Sommer F, Stukenbrock E, Weiland-Bräuer N, Rosenstiel P, Franke A, Bosch T, Baines JF. Rausch P, et al. Microbiome. 2019 Sep 14;7(1):133. doi: 10.1186/s40168-019-0743-1. Microbiome. 2019. PMID: 31521200 Free PMC article.
The genetic basis for ecological adaptation of the Atlantic herring revealed by genome sequencing.
Martinez Barrio A, Lamichhaney S, Fan G, Rafati N, Pettersson M, Zhang H, Dainat J, Ekman D, Höppner M, Jern P, Martin M, Nystedt B, Liu X, Chen W, Liang X, Shi C, Fu Y, Ma K, Zhan X, Feng C, Gustafson U, Rubin CJ, Sällman Almén M, Blass M, Casini M, Folkvord A, Laikre L, Ryman N, Ming-Yuen Lee S, Xu X, Andersson L. Martinez Barrio A, et al. Elife. 2016 May 3;5:e12081. doi: 10.7554/eLife.12081. Elife. 2016. PMID: 27138043 Free PMC article.
The evolution of microendemism in a reef fish (Hypoplectrus maya).
Moran BM, Hench K, Waples RS, Höppner MP, Baldwin CC, McMillan WO, Puebla O. Moran BM, et al. Among authors: hoppner mp. Mol Ecol. 2019 Jun;28(11):2872-2885. doi: 10.1111/mec.15110. Epub 2019 Jun 23. Mol Ecol. 2019. PMID: 31017341
Microbiomarkers in inflammatory bowel diseases: caveats come with caviar.
Sommer F, Rühlemann MC, Bang C, Höppner M, Rehman A, Kaleta C, Schmitt-Kopplin P, Dempfle A, Weidinger S, Ellinghaus E, Krauss-Etschmann S, Schmidt-Arras D, Aden K, Schulte D, Ellinghaus D, Schreiber S, Tholey A, Rupp J, Laudes M, Baines JF, Rosenstiel P, Franke A. Sommer F, et al. Gut. 2017 Oct;66(10):1734-1738. doi: 10.1136/gutjnl-2016-313678. Epub 2017 Jul 21. Gut. 2017. PMID: 28733278 Free PMC article. No abstract available.
A universal genomic coordinate translator for comparative genomics.
Zamani N, Sundström G, Meadows JR, Höppner MP, Dainat J, Lantz H, Haas BJ, Grabherr MG. Zamani N, et al. Among authors: hoppner mp. BMC Bioinformatics. 2014 Jun 30;15:227. doi: 10.1186/1471-2105-15-227. BMC Bioinformatics. 2014. PMID: 24976580 Free PMC article.
Serendipitous Meta-Transcriptomics: The Fungal Community of Norway Spruce (Picea abies).
Delhomme N, Sundström G, Zamani N, Lantz H, Lin YC, Hvidsten TR, Höppner MP, Jern P, Van de Peer Y, Lundeberg J, Grabherr MG, Street NR. Delhomme N, et al. Among authors: hoppner mp. PLoS One. 2015 Sep 28;10(9):e0139080. doi: 10.1371/journal.pone.0139080. eCollection 2015. PLoS One. 2015. PMID: 26413905 Free PMC article.
16 results