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CATdb: a public access to Arabidopsis transcriptome data from the URGV-CATMA platform.
Gagnot S, Tamby JP, Martin-Magniette ML, Bitton F, Taconnat L, Balzergue S, Aubourg S, Renou JP, Lecharny A, Brunaud V. Gagnot S, et al. Among authors: brunaud v. Nucleic Acids Res. 2008 Jan;36(Database issue):D986-90. doi: 10.1093/nar/gkm757. Epub 2007 Oct 16. Nucleic Acids Res. 2008. PMID: 17940091 Free PMC article.
Exploration of plant genomes in the FLAGdb++ environment.
Dèrozier S, Samson F, Tamby JP, Guichard C, Brunaud V, Grevet P, Gagnot S, Label P, Leplé JC, Lecharny A, Aubourg S. Dèrozier S, et al. Among authors: brunaud v. Plant Methods. 2011 Mar 29;7:8. doi: 10.1186/1746-4811-7-8. Plant Methods. 2011. PMID: 21447150 Free PMC article.
Integrative epigenomic mapping defines four main chromatin states in Arabidopsis.
Roudier F, Ahmed I, Bérard C, Sarazin A, Mary-Huard T, Cortijo S, Bouyer D, Caillieux E, Duvernois-Berthet E, Al-Shikhley L, Giraut L, Després B, Drevensek S, Barneche F, Dèrozier S, Brunaud V, Aubourg S, Schnittger A, Bowler C, Martin-Magniette ML, Robin S, Caboche M, Colot V. Roudier F, et al. Among authors: brunaud v. EMBO J. 2011 May 18;30(10):1928-38. doi: 10.1038/emboj.2011.103. Epub 2011 Apr 12. EMBO J. 2011. PMID: 21487388 Free PMC article.
Unsupervised classification for tiling arrays: ChIP-chip and transcriptome.
Bérard C, Martin-Magniette ML, Brunaud V, Aubourg S, Robin S. Bérard C, et al. Among authors: brunaud v. Stat Appl Genet Mol Biol. 2011 Nov 1;10(1):/j/sagmb.2011.10.issue-1/1544-6115.1692/1544-6115.1692.xml. doi: 10.2202/1544-6115.1692. Stat Appl Genet Mol Biol. 2011. PMID: 23089815
The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana.
Lange H, Zuber H, Sement FM, Chicher J, Kuhn L, Hammann P, Brunaud V, Bérard C, Bouteiller N, Balzergue S, Aubourg S, Martin-Magniette ML, Vaucheret H, Gagliardi D. Lange H, et al. Among authors: brunaud v. PLoS Genet. 2014 Aug 21;10(8):e1004564. doi: 10.1371/journal.pgen.1004564. eCollection 2014 Aug. PLoS Genet. 2014. PMID: 25144737 Free PMC article.
MYB118 represses endosperm maturation in seeds of Arabidopsis.
Barthole G, To A, Marchive C, Brunaud V, Soubigou-Taconnat L, Berger N, Dubreucq B, Lepiniec L, Baud S. Barthole G, et al. Among authors: brunaud v. Plant Cell. 2014 Sep;26(9):3519-37. doi: 10.1105/tpc.114.130021. Epub 2014 Sep 5. Plant Cell. 2014. PMID: 25194028 Free PMC article.
GEM2Net: from gene expression modeling to -omics networks, a new CATdb module to investigate Arabidopsis thaliana genes involved in stress response.
Zaag R, Tamby JP, Guichard C, Tariq Z, Rigaill G, Delannoy E, Renou JP, Balzergue S, Mary-Huard T, Aubourg S, Martin-Magniette ML, Brunaud V. Zaag R, et al. Among authors: brunaud v. Nucleic Acids Res. 2015 Jan;43(Database issue):D1010-7. doi: 10.1093/nar/gku1155. Epub 2014 Nov 11. Nucleic Acids Res. 2015. PMID: 25392409 Free PMC article.
48 results